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The map label for this gene is ybfB [H]

Identifier: 222102734

GI number: 222102734

Start: 388188

End: 389435

Strand: Reverse

Name: ybfB [H]

Synonym: Avi_7416

Alternate gene names: 222102734

Gene position: 389435-388188 (Counterclockwise)

Preceding gene: 222102741

Following gene: 222102729

Centisome position: 61.64

GC content: 56.01

Gene sequence:

>1248_bases
ATGAGGCTGTTTCCATTTCATTCTCCACATCCTCGGTATGGCCGAGCCATCCTGGCCGCATGCTCGCTTATCCTATGCAT
GAACGCCGCGTTTCCCATCTACGGCGCAAGCGTGATCAACACATCCATGGTCACATCATTGGGCTGGGATCGCAGCCTCC
TCGGGCTGCTCGTGTCCGTCAACATGGCCGTTACCGGCATTACAGCGCCGCTCGTCGGATCCGCAGTCAATCGCTTTGGT
TCGCGCCTCGTGCTGATCGCAGGCAGCCTGTTACTGCTGCTTGGAGCGAGCGCAATGGCTTTCTGGGTTGAAAAGCCCTG
GCAGGTCGTCGTTGCATTTGGCATCCTCATGGGATTGGCCATGAGTGCTGGTGGTTTCGTTGCCAATCAGGCTTGTGTCG
CAGCCTGGTTTGATAAAAAGCGGGCTCGGGCCTTTGCGGTTCTCTATGCCACTATGGGCGTTGGCGGTTTTGTTGCTGCA
CCGCTGATCAGTCGGTCCATTGCCCTTAGCGATTGGCGTGCCGGATGGCTCGTCTTCATCGGTGCCGGAGCCTTGGCTTT
GTTTCTGGCAATCTTCGTTGTGCGCGATACGCCACCGGGCGCAAGCGATGCCAATGTCGCGAAATTCGCACAATTCGATG
CTTCAGGAGACCAGAAGGGATCGGTCTATAAATCGCCGGCACTGTGGCTGGTGATCACATGCATTGTCACGGCTGGTGCC
GGATGTTCATTCTATATCGCCCATGGCCTGGCGCTTCTGCATGATTCCAGCTTTGCTCCGACGGATGCTGCAGCATCACT
ATCGCTGATGGCCGCCTCGACCTTGCTGGGCAACTTCGCCGTTGGAGCCTTCAGTGAGCGTTTGGGAACCCGCAATATTC
TCGCGGCTGGCCTTCTTGTCTTTTCTTTGGGTATATTGACACTCGGTTACGCTCATAATTCAATCATGCTCTATGCCTAT
GCCGTCTTGTTGGGCGCGGGCTATGGTGCGGTGCAGGTAAGCTCAATGGCCCTGCTGAGCGAAACCTTTGATTCACGGCA
TTTTGCTGCGGTCTCCGGCTTTGCCATTTCAATGATGACGATCGCAAGCGCTGTTGCGCCAATCGTCGTCGGACAGTTGT
TCGATCACACCCATACCTATATGCCAAGTGTCCTGACCATTGCCGCGCTGAATGGTATTGCCGCAGTGCTGATGGCAACC
AATCGTCGGGCTTTTTTGTCCGGCACCCCCCAGGTACACGCCACCTAA

Upstream 100 bases:

>100_bases
GGGTGTTGCTGAAGGCTTTAGTGTTCGAGTCACGCAGTTAAATGGTTAATTGCGCCCGTCTCCGATATTCGGAACGTTCT
CGATATCAAGAGGTCGCCCA

Downstream 100 bases:

>100_bases
ATGGTTGAGGGGCGGCGCCCGCGCCCGCCCGGCCTTACAGGCGTGGTTACGGACCCGCAACGGGATCAGATCGCAATGAA
ACAACAGGAGAAGGTCGACG

Product: Permeases of the major facilitator superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRLFPFHSPHPRYGRAILAACSLILCMNAAFPIYGASVINTSMVTSLGWDRSLLGLLVSVNMAVTGITAPLVGSAVNRFG
SRLVLIAGSLLLLLGASAMAFWVEKPWQVVVAFGILMGLAMSAGGFVANQACVAAWFDKKRARAFAVLYATMGVGGFVAA
PLISRSIALSDWRAGWLVFIGAGALALFLAIFVVRDTPPGASDANVAKFAQFDASGDQKGSVYKSPALWLVITCIVTAGA
GCSFYIAHGLALLHDSSFAPTDAAASLSLMAASTLLGNFAVGAFSERLGTRNILAAGLLVFSLGILTLGYAHNSIMLYAY
AVLLGAGYGAVQVSSMALLSETFDSRHFAAVSGFAISMMTIASAVAPIVVGQLFDHTHTYMPSVLTIAALNGIAAVLMAT
NRRAFLSGTPQVHAT

Sequences:

>Translated_415_residues
MRLFPFHSPHPRYGRAILAACSLILCMNAAFPIYGASVINTSMVTSLGWDRSLLGLLVSVNMAVTGITAPLVGSAVNRFG
SRLVLIAGSLLLLLGASAMAFWVEKPWQVVVAFGILMGLAMSAGGFVANQACVAAWFDKKRARAFAVLYATMGVGGFVAA
PLISRSIALSDWRAGWLVFIGAGALALFLAIFVVRDTPPGASDANVAKFAQFDASGDQKGSVYKSPALWLVITCIVTAGA
GCSFYIAHGLALLHDSSFAPTDAAASLSLMAASTLLGNFAVGAFSERLGTRNILAAGLLVFSLGILTLGYAHNSIMLYAY
AVLLGAGYGAVQVSSMALLSETFDSRHFAAVSGFAISMMTIASAVAPIVVGQLFDHTHTYMPSVLTIAALNGIAAVLMAT
NRRAFLSGTPQVHAT
>Mature_415_residues
MRLFPFHSPHPRYGRAILAACSLILCMNAAFPIYGASVINTSMVTSLGWDRSLLGLLVSVNMAVTGITAPLVGSAVNRFG
SRLVLIAGSLLLLLGASAMAFWVEKPWQVVVAFGILMGLAMSAGGFVANQACVAAWFDKKRARAFAVLYATMGVGGFVAA
PLISRSIALSDWRAGWLVFIGAGALALFLAIFVVRDTPPGASDANVAKFAQFDASGDQKGSVYKSPALWLVITCIVTAGA
GCSFYIAHGLALLHDSSFAPTDAAASLSLMAASTLLGNFAVGAFSERLGTRNILAAGLLVFSLGILTLGYAHNSIMLYAY
AVLLGAGYGAVQVSSMALLSETFDSRHFAAVSGFAISMMTIASAVAPIVVGQLFDHTHTYMPSVLTIAALNGIAAVLMAT
NRRAFLSGTPQVHAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43185; Mature: 43185

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFPFHSPHPRYGRAILAACSLILCMNAAFPIYGASVINTSMVTSLGWDRSLLGLLVSV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
NMAVTGITAPLVGSAVNRFGSRLVLIAGSLLLLLGASAMAFWVEKPWQVVVAFGILMGLA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
MSAGGFVANQACVAAWFDKKRARAFAVLYATMGVGGFVAAPLISRSIALSDWRAGWLVFI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEE
GAGALALFLAIFVVRDTPPGASDANVAKFAQFDASGDQKGSVYKSPALWLVITCIVTAGA
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHCCC
GCSFYIAHGLALLHDSSFAPTDAAASLSLMAASTLLGNFAVGAFSERLGTRNILAAGLLV
CCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FSLGILTLGYAHNSIMLYAYAVLLGAGYGAVQVSSMALLSETFDSRHFAAVSGFAISMMT
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IASAVAPIVVGQLFDHTHTYMPSVLTIAALNGIAAVLMATNRRAFLSGTPQVHAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
>Mature Secondary Structure
MRLFPFHSPHPRYGRAILAACSLILCMNAAFPIYGASVINTSMVTSLGWDRSLLGLLVSV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
NMAVTGITAPLVGSAVNRFGSRLVLIAGSLLLLLGASAMAFWVEKPWQVVVAFGILMGLA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
MSAGGFVANQACVAAWFDKKRARAFAVLYATMGVGGFVAAPLISRSIALSDWRAGWLVFI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEE
GAGALALFLAIFVVRDTPPGASDANVAKFAQFDASGDQKGSVYKSPALWLVITCIVTAGA
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHCCC
GCSFYIAHGLALLHDSSFAPTDAAASLSLMAASTLLGNFAVGAFSERLGTRNILAAGLLV
CCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FSLGILTLGYAHNSIMLYAYAVLLGAGYGAVQVSSMALLSETFDSRHFAAVSGFAISMMT
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IASAVAPIVVGQLFDHTHTYMPSVLTIAALNGIAAVLMATNRRAFLSGTPQVHAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]