| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is 222102731
Identifier: 222102731
GI number: 222102731
Start: 384226
End: 385377
Strand: Direct
Name: 222102731
Synonym: Avi_7411
Alternate gene names: NA
Gene position: 384226-385377 (Clockwise)
Preceding gene: 222102730
Following gene: 222102732
Centisome position: 60.82
GC content: 58.16
Gene sequence:
>1152_bases ATGAGTATCCGTGGCAAGGCCTTTATTGTTGGGGCCTACGAGCATCCGGGCCGTAATCTGCCTGACCATTCAGTGCAGCA AATCCATGCAGAATGTGCGATGGGCGCACTTAGCGACGCGGGCCTGTCCATCAAAGACGTGGATGGTTATTTCAGCAATG GCCAATTGGGGTTCGGCGGCATTTCCATGGCCGAATATCTCGGCCTGAGATTGAGCTACATCGATTCCACCTTTACCGGC GGCTCCTCCTATATGGCGCATGTCGGCCATGCCGCTGCTGCCATTGCCGCAGGAAAGTGCAAGGTCGCCCTCATCACGCA AGGGGCCAAGGTGCGGGGTGTCATTCGCGGTGCCAAGCATACTGCGGATACACCGGAATTTCCCTTCGAGACGGTCTATG GCGAAACCAATGCGGCCATTTATGCGCTGGCTGCGCGTCGGCATATGCATGAATACGGTACAACGGCAGAACAGCTCGCC GCCGTTAAAGTTGCGGCGGCGGCCTATGCGCAACACAATCCAAATGCGCTGTTGCGCAAGCTCGTTTCAATCGACGATGT TATGAATTCGCCAATCATTGCCGATCCCCTTCATCGGCTCGATTGCTGCGTTGTTACCGATGGCGGCGGCGCTCTTGTTC TTGTTGCTCCTGAAATCGCGCGAAGCTTGAAGCGCCAGAGTGTCAAGCTTTTGGGTCATGCCGAAGCGATCCGGCATGGT GGAGATGGCCCAAGCGATTTTGCCAGCACGGCAGCGGCGCTTTCAGGACCCCGTGCATTCACTGAGGCGGGCGTCAGCCC TCGAGACGTTCGGTATGCCTCGATTTACGACTCCTTCACCATCACCGTCATCATGACTTTGGAGGATCTCGGCTTTTGCG GGAAAGGTGAGGGTGGCGCATTTGTTGCCAGCGGCGCGCTGGGGCTTGATGGTCTGCTCCCGATCAACACGGATGGCGGC GGCCTCTGCAACAACCATCCGGGCTACCAAGGCGGTATGGTGCGAACCATCGAAGCGGTGCGCCAGCTGCGGGGCGAAGC CAATCCAAATACACAGGTCAAAAACTGCACCATAGCACTGGCGCACGGAACCGGCGGCGGCATGTCGCGGCACGCCAGCG TTACGCTGGTGTTGGGTCAGGAGGACGCATAA
Upstream 100 bases:
>100_bases TTCTGGTGGTGCCTGCGCAATGCTGGGCTGAACGATAGCCCCGAGGCCTTTGGTCGTTTGTTCACCAAACACTTGCCCGC GTAAACATTGGGGAAATGAC
Downstream 100 bases:
>100_bases TGGAAGACCGTCAAGAAGTGCAAGCGCTTCCCATTCCTGTGCCGGTGGTTTTCCCGGAAACAGAACCGTTCTGGACGAAT GCCCGGAAAGGCAAGTTGCT
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSIRGKAFIVGAYEHPGRNLPDHSVQQIHAECAMGALSDAGLSIKDVDGYFSNGQLGFGGISMAEYLGLRLSYIDSTFTG GSSYMAHVGHAAAAIAAGKCKVALITQGAKVRGVIRGAKHTADTPEFPFETVYGETNAAIYALAARRHMHEYGTTAEQLA AVKVAAAAYAQHNPNALLRKLVSIDDVMNSPIIADPLHRLDCCVVTDGGGALVLVAPEIARSLKRQSVKLLGHAEAIRHG GDGPSDFASTAAALSGPRAFTEAGVSPRDVRYASIYDSFTITVIMTLEDLGFCGKGEGGAFVASGALGLDGLLPINTDGG GLCNNHPGYQGGMVRTIEAVRQLRGEANPNTQVKNCTIALAHGTGGGMSRHASVTLVLGQEDA
Sequences:
>Translated_383_residues MSIRGKAFIVGAYEHPGRNLPDHSVQQIHAECAMGALSDAGLSIKDVDGYFSNGQLGFGGISMAEYLGLRLSYIDSTFTG GSSYMAHVGHAAAAIAAGKCKVALITQGAKVRGVIRGAKHTADTPEFPFETVYGETNAAIYALAARRHMHEYGTTAEQLA AVKVAAAAYAQHNPNALLRKLVSIDDVMNSPIIADPLHRLDCCVVTDGGGALVLVAPEIARSLKRQSVKLLGHAEAIRHG GDGPSDFASTAAALSGPRAFTEAGVSPRDVRYASIYDSFTITVIMTLEDLGFCGKGEGGAFVASGALGLDGLLPINTDGG GLCNNHPGYQGGMVRTIEAVRQLRGEANPNTQVKNCTIALAHGTGGGMSRHASVTLVLGQEDA >Mature_382_residues SIRGKAFIVGAYEHPGRNLPDHSVQQIHAECAMGALSDAGLSIKDVDGYFSNGQLGFGGISMAEYLGLRLSYIDSTFTGG SSYMAHVGHAAAAIAAGKCKVALITQGAKVRGVIRGAKHTADTPEFPFETVYGETNAAIYALAARRHMHEYGTTAEQLAA VKVAAAAYAQHNPNALLRKLVSIDDVMNSPIIADPLHRLDCCVVTDGGGALVLVAPEIARSLKRQSVKLLGHAEAIRHGG DGPSDFASTAAALSGPRAFTEAGVSPRDVRYASIYDSFTITVIMTLEDLGFCGKGEGGAFVASGALGLDGLLPINTDGGG LCNNHPGYQGGMVRTIEAVRQLRGEANPNTQVKNCTIALAHGTGGGMSRHASVTLVLGQEDA
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI302344762, Length=239, Percent_Identity=28.0334728033473, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI302344760, Length=239, Percent_Identity=28.0334728033473, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI302344767, Length=239, Percent_Identity=28.0334728033473, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI19923233, Length=239, Percent_Identity=28.0334728033473, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI55956775, Length=199, Percent_Identity=26.1306532663317, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17537653, Length=237, Percent_Identity=29.535864978903, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI19921506, Length=392, Percent_Identity=27.0408163265306, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI24585051, Length=392, Percent_Identity=27.2959183673469, Blast_Score=125, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 39787; Mature: 39655
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRGKAFIVGAYEHPGRNLPDHSVQQIHAECAMGALSDAGLSIKDVDGYFSNGQLGFGG CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCEEEECCCCCCCCCCCCCC ISMAEYLGLRLSYIDSTFTGGSSYMAHVGHAAAAIAAGKCKVALITQGAKVRGVIRGAKH HHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEHEEECCCC TADTPEFPFETVYGETNAAIYALAARRHMHEYGTTAEQLAAVKVAAAAYAQHNPNALLRK CCCCCCCCCHHHCCCCCHHEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHH LVSIDDVMNSPIIADPLHRLDCCVVTDGGGALVLVAPEIARSLKRQSVKLLGHAEAIRHG HHHHHHHHCCCCCCCCHHHCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCC GDGPSDFASTAAALSGPRAFTEAGVSPRDVRYASIYDSFTITVIMTLEDLGFCGKGEGGA CCCHHHHHHHHHHHCCCHHHHHCCCCHHHEEEEEEECCEEEEEEEEEECCCCCCCCCCCE FVASGALGLDGLLPINTDGGGLCNNHPGYQGGMVRTIEAVRQLRGEANPNTQVKNCTIAL EEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEE AHGTGGGMSRHASVTLVLGQEDA EECCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure SIRGKAFIVGAYEHPGRNLPDHSVQQIHAECAMGALSDAGLSIKDVDGYFSNGQLGFGG CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCEEEECCCCCCCCCCCCCC ISMAEYLGLRLSYIDSTFTGGSSYMAHVGHAAAAIAAGKCKVALITQGAKVRGVIRGAKH HHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEHEEECCCC TADTPEFPFETVYGETNAAIYALAARRHMHEYGTTAEQLAAVKVAAAAYAQHNPNALLRK CCCCCCCCCHHHCCCCCHHEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHH LVSIDDVMNSPIIADPLHRLDCCVVTDGGGALVLVAPEIARSLKRQSVKLLGHAEAIRHG HHHHHHHHCCCCCCCCHHHCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCC GDGPSDFASTAAALSGPRAFTEAGVSPRDVRYASIYDSFTITVIMTLEDLGFCGKGEGGA CCCHHHHHHHHHHHCCCHHHHHCCCCHHHEEEEEEECCEEEEEEEEEECCCCCCCCCCCE FVASGALGLDGLLPINTDGGGLCNNHPGYQGGMVRTIEAVRQLRGEANPNTQVKNCTIAL EEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEE AHGTGGGMSRHASVTLVLGQEDA EECCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]