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The map label for this gene is fucU [H]

Identifier: 222102689

GI number: 222102689

Start: 337242

End: 337697

Strand: Direct

Name: fucU [H]

Synonym: Avi_7360

Alternate gene names: 222102689

Gene position: 337242-337697 (Clockwise)

Preceding gene: 222102688

Following gene: 222102690

Centisome position: 53.38

GC content: 57.46

Gene sequence:

>456_bases
ATGCTGAAAAATCTTCATCCTGCCTTGAATGCCGACGTGCTGCATGCGCTGCGATCCATGGGGCATGGCGATACACTTGT
GATTTCCGATACCAATTTCCCCAGCGATAGCGTGGCACGCCAGACCGTGCTGGGCCGTCCGCTCTCCATGGCTAATCTAT
CCGCCGCAGAAGCTGTGCGCGTCCTGCTGTCGGTTTTGCCGCTCGATACACCCTTGCAAAATTCGGCAGGTCGTATGGAA
GTCATGGGTGCCCCGGACGACATTCAGCCGGTGCAACGCGAGGTCCAAGTGGAAATCGACCGCGCCGAGGGCAAGCCGTC
GCCGATGTACGGCATCGAGCGGTTTGCATTCTACGATCTTGCAAAGAAGGCCTATTGTGTGATTTCAACCGGCGAAACCC
GCTTCTACGGCTGCTTCCTGTTCACCAAGGGCGTCATCCCACCGGCTGGAGCATAA

Upstream 100 bases:

>100_bases
TCGGTATTTTTCTGGAGCGCTATATCGTCAAGGGCCTGACCGCCGGTGCGGTCAAATAGGCCCGTCATTGCTGTAAGTTA
AGTTAAACAAGGAGTGTCCC

Downstream 100 bases:

>100_bases
GGAGAGCAGGATGGGCAAGGGCGTTTCGATACTCGGAATCTTTGTTGCCGATACCGCCTATCTCGCGGCCCGGCTGCCGG
TCGTAGGCGAGACGATCACC

Product: hypothetical protein

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MLKNLHPALNADVLHALRSMGHGDTLVISDTNFPSDSVARQTVLGRPLSMANLSAAEAVRVLLSVLPLDTPLQNSAGRME
VMGAPDDIQPVQREVQVEIDRAEGKPSPMYGIERFAFYDLAKKAYCVISTGETRFYGCFLFTKGVIPPAGA

Sequences:

>Translated_151_residues
MLKNLHPALNADVLHALRSMGHGDTLVISDTNFPSDSVARQTVLGRPLSMANLSAAEAVRVLLSVLPLDTPLQNSAGRME
VMGAPDDIQPVQREVQVEIDRAEGKPSPMYGIERFAFYDLAKKAYCVISTGETRFYGCFLFTKGVIPPAGA
>Mature_151_residues
MLKNLHPALNADVLHALRSMGHGDTLVISDTNFPSDSVARQTVLGRPLSMANLSAAEAVRVLLSVLPLDTPLQNSAGRME
VMGAPDDIQPVQREVQVEIDRAEGKPSPMYGIERFAFYDLAKKAYCVISTGETRFYGCFLFTKGVIPPAGA

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=150, Percent_Identity=36.6666666666667, Blast_Score=90, Evalue=6e-19,
Organism=Homo sapiens, GI148596951, Length=135, Percent_Identity=35.5555555555556, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1789169, Length=150, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 16346; Mature: 16346

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNLHPALNADVLHALRSMGHGDTLVISDTNFPSDSVARQTVLGRPLSMANLSAAEAVR
CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHCCHHHHHH
VLLSVLPLDTPLQNSAGRMEVMGAPDDIQPVQREVQVEIDRAEGKPSPMYGIERFAFYDL
HHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHH
AKKAYCVISTGETRFYGCFLFTKGVIPPAGA
HCCEEEEEECCCCEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MLKNLHPALNADVLHALRSMGHGDTLVISDTNFPSDSVARQTVLGRPLSMANLSAAEAVR
CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHCCHHHHHH
VLLSVLPLDTPLQNSAGRMEVMGAPDDIQPVQREVQVEIDRAEGKPSPMYGIERFAFYDL
HHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHH
AKKAYCVISTGETRFYGCFLFTKGVIPPAGA
HCCEEEEEECCCCEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA