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The map label for this gene is ycjP [C]

Identifier: 222102688

GI number: 222102688

Start: 336280

End: 337200

Strand: Direct

Name: ycjP [C]

Synonym: Avi_7358

Alternate gene names: 222102688

Gene position: 336280-337200 (Clockwise)

Preceding gene: 222102687

Following gene: 222102689

Centisome position: 53.23

GC content: 58.85

Gene sequence:

>921_bases
ATGGCACGCAACCCCACTCGCCATAGCGGTCCTGAAACAAGGTTTCGCCGCCCTCGCTTCATGACGGGCAGCCTGCTGAT
TTACACGGCGCTGGTGTTCTGGGCCTTTATCTCCCTGTTTCCGATCTACTGGACCATTACCACCTCGTTCAAGACCGCCG
TCAATGTAACCCAGGGCCACCTCATTCCCTTCGTCGATTTTACGCCGGACTGGAAGGGCTGGCGCTCGCTTGGCCTTTCG
CCGGATACGATATTTGTGGCCTCGACGGTGCGCGACGAATTCATGCGGCGCTTCTTCAACAGCGTCGTCGCCTCGGCTGG
AGCCTCGTTTCTGGCTGTGGTGATCGGATCGCTGGCGGCCTATGGCCTCAGCCGGTTTTCCTACAAATTTCTCTGGTTGC
GCAACAAGGATATCTCGTTCTTCTTCCTGTCCCAGCTGATCCTGCCGCCCGTCGTGCTCGCCATGCCGTTTCTGGTGCTC
TATAAACACCTGATGCTGCTGGATACGCTGACCGGGCTTGTCCTCGTCTATACGCTGATGGTGCTGCCCATTGTCATCTG
GATCATGCGGGACCAGTTCGACACGATCCCCGTCGAACTCGAGCAGGCAGCGCTGGTTGACGGCTGCTCGATCTGGGGCG
CGTTTATGCGGATCGTCCTGCCCATCGCCCTGCCGGGAATGGTGGCCGCCTTCATCCTTTCGGTCATTCTCTGCTGGAAC
GAATATTTCTTCGCAGCGCTGCTGACCAGTTCGAACGCCAAGACGCTTCCCGTCATGGTGGCCAGCCAGACCGGCTCGCA
AGGGATCAATTGGTGGTCCATGGCCGCTATCGCCACCGCCGCCATCATGCCGCTCGTTCTGGTCGGTATTTTTCTGGAGC
GCTATATCGTCAAGGGCCTGACCGCCGGTGCGGTCAAATAG

Upstream 100 bases:

>100_bases
ATGCTGGCCGAGTTCTATCTCGTCATCATCATTATCTTCGTCTCGCTCATCCTCAAGGTGACGAGCCGCTGGCTGCAACG
TTCCAACTGAGGGTTAGACC

Downstream 100 bases:

>100_bases
GCCCGTCATTGCTGTAAGTTAAGTTAAACAAGGAGTGTCCCATGCTGAAAAATCTTCATCCTGCCTTGAATGCCGACGTG
CTGCATGCGCTGCGATCCAT

Product: ABC transporter membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MARNPTRHSGPETRFRRPRFMTGSLLIYTALVFWAFISLFPIYWTITTSFKTAVNVTQGHLIPFVDFTPDWKGWRSLGLS
PDTIFVASTVRDEFMRRFFNSVVASAGASFLAVVIGSLAAYGLSRFSYKFLWLRNKDISFFFLSQLILPPVVLAMPFLVL
YKHLMLLDTLTGLVLVYTLMVLPIVIWIMRDQFDTIPVELEQAALVDGCSIWGAFMRIVLPIALPGMVAAFILSVILCWN
EYFFAALLTSSNAKTLPVMVASQTGSQGINWWSMAAIATAAIMPLVLVGIFLERYIVKGLTAGAVK

Sequences:

>Translated_306_residues
MARNPTRHSGPETRFRRPRFMTGSLLIYTALVFWAFISLFPIYWTITTSFKTAVNVTQGHLIPFVDFTPDWKGWRSLGLS
PDTIFVASTVRDEFMRRFFNSVVASAGASFLAVVIGSLAAYGLSRFSYKFLWLRNKDISFFFLSQLILPPVVLAMPFLVL
YKHLMLLDTLTGLVLVYTLMVLPIVIWIMRDQFDTIPVELEQAALVDGCSIWGAFMRIVLPIALPGMVAAFILSVILCWN
EYFFAALLTSSNAKTLPVMVASQTGSQGINWWSMAAIATAAIMPLVLVGIFLERYIVKGLTAGAVK
>Mature_305_residues
ARNPTRHSGPETRFRRPRFMTGSLLIYTALVFWAFISLFPIYWTITTSFKTAVNVTQGHLIPFVDFTPDWKGWRSLGLSP
DTIFVASTVRDEFMRRFFNSVVASAGASFLAVVIGSLAAYGLSRFSYKFLWLRNKDISFFFLSQLILPPVVLAMPFLVLY
KHLMLLDTLTGLVLVYTLMVLPIVIWIMRDQFDTIPVELEQAALVDGCSIWGAFMRIVLPIALPGMVAAFILSVILCWNE
YFFAALLTSSNAKTLPVMVASQTGSQGINWWSMAAIATAAIMPLVLVGIFLERYIVKGLTAGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=30.8510638297872, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1790464, Length=273, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1789860, Length=280, Percent_Identity=26.0714285714286, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34219; Mature: 34088

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARNPTRHSGPETRFRRPRFMTGSLLIYTALVFWAFISLFPIYWTITTSFKTAVNVTQGH
CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LIPFVDFTPDWKGWRSLGLSPDTIFVASTVRDEFMRRFFNSVVASAGASFLAVVIGSLAA
EEEEECCCCCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YGLSRFSYKFLWLRNKDISFFFLSQLILPPVVLAMPFLVLYKHLMLLDTLTGLVLVYTLM
HHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLPIVIWIMRDQFDTIPVELEQAALVDGCSIWGAFMRIVLPIALPGMVAAFILSVILCWN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYFFAALLTSSNAKTLPVMVASQTGSQGINWWSMAAIATAAIMPLVLVGIFLERYIVKGL
HHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TAGAVK
CCCCCC
>Mature Secondary Structure 
ARNPTRHSGPETRFRRPRFMTGSLLIYTALVFWAFISLFPIYWTITTSFKTAVNVTQGH
CCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LIPFVDFTPDWKGWRSLGLSPDTIFVASTVRDEFMRRFFNSVVASAGASFLAVVIGSLAA
EEEEECCCCCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YGLSRFSYKFLWLRNKDISFFFLSQLILPPVVLAMPFLVLYKHLMLLDTLTGLVLVYTLM
HHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLPIVIWIMRDQFDTIPVELEQAALVDGCSIWGAFMRIVLPIALPGMVAAFILSVILCWN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYFFAALLTSSNAKTLPVMVASQTGSQGINWWSMAAIATAAIMPLVLVGIFLERYIVKGL
HHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TAGAVK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]