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The map label for this gene is fucU [H]

Identifier: 222102684

GI number: 222102684

Start: 331392

End: 331832

Strand: Reverse

Name: fucU [H]

Synonym: Avi_7353

Alternate gene names: 222102684

Gene position: 331832-331392 (Counterclockwise)

Preceding gene: 222102697

Following gene: 222102683

Centisome position: 52.52

GC content: 56.24

Gene sequence:

>441_bases
ATGCTGAAGGGAATAGATCCGGTTTTGAACGCTGAATTGCTGCATGCCTTGATGCTGATGGGCCACGGCGACCAATTGGT
GCTGTGCGATATCAACCATCCGGCCGAGACGATTGCCAAGCACACAACCTATGGCAAGCTGATCAATCTGTCGGGTTGCG
GTCTTGAGGTTGCCACGGCGGCGATCCTGACGCTTTTCCCCCTGGATACCTTTGTGGAAGCGCCGGTGAAGAGGATGCAG
GTGGTTGGTGATCCCGGTGGGCAGGTGCCGATCTTTTCGGCCATCCAGCGTGTGGTGGACAATGCGGAAGGACGACCGGT
GAAGATCGACGCCCTGGAACGTTTCGCGTTTTATGCTGAGGCAAAGGCGTCCTTTGCGATCGTCAGAACGTCCGATCCCG
GCCCCTACGGATGTTTTATTTTCAGCAAGGGCGTCGTTTGA

Upstream 100 bases:

>100_bases
GCCCTCGCCCCGGCCTGTTTAAGCATCGCCGCATCGGGAAACATCACAAAAAAATGCAAAATCGTGAAGAAATTCACAGC
CACAAAGGGAAGGCAAGCCA

Downstream 100 bases:

>100_bases
TACAAACTCGCCAAGGCGGAATGACCTATCAGAGGCGTGAATCGATCAGGCCGGATCGATTCAGATAACTCGTTGGACGC
TTGAATCGAACCACGCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLKGIDPVLNAELLHALMLMGHGDQLVLCDINHPAETIAKHTTYGKLINLSGCGLEVATAAILTLFPLDTFVEAPVKRMQ
VVGDPGGQVPIFSAIQRVVDNAEGRPVKIDALERFAFYAEAKASFAIVRTSDPGPYGCFIFSKGVV

Sequences:

>Translated_146_residues
MLKGIDPVLNAELLHALMLMGHGDQLVLCDINHPAETIAKHTTYGKLINLSGCGLEVATAAILTLFPLDTFVEAPVKRMQ
VVGDPGGQVPIFSAIQRVVDNAEGRPVKIDALERFAFYAEAKASFAIVRTSDPGPYGCFIFSKGVV
>Mature_146_residues
MLKGIDPVLNAELLHALMLMGHGDQLVLCDINHPAETIAKHTTYGKLINLSGCGLEVATAAILTLFPLDTFVEAPVKRMQ
VVGDPGGQVPIFSAIQRVVDNAEGRPVKIDALERFAFYAEAKASFAIVRTSDPGPYGCFIFSKGVV

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=148, Percent_Identity=39.1891891891892, Blast_Score=100, Evalue=3e-22,
Organism=Homo sapiens, GI148596951, Length=132, Percent_Identity=39.3939393939394, Blast_Score=90, Evalue=6e-19,
Organism=Escherichia coli, GI1789169, Length=148, Percent_Identity=33.7837837837838, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 15652; Mature: 15652

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGIDPVLNAELLHALMLMGHGDQLVLCDINHPAETIAKHTTYGKLINLSGCGLEVATA
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCEEEECCCCCHHHHHH
AILTLFPLDTFVEAPVKRMQVVGDPGGQVPIFSAIQRVVDNAEGRPVKIDALERFAFYAE
HHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
AKASFAIVRTSDPGPYGCFIFSKGVV
CCCEEEEEECCCCCCEEEEEEECCCC
>Mature Secondary Structure
MLKGIDPVLNAELLHALMLMGHGDQLVLCDINHPAETIAKHTTYGKLINLSGCGLEVATA
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCEEEECCCCCHHHHHH
AILTLFPLDTFVEAPVKRMQVVGDPGGQVPIFSAIQRVVDNAEGRPVKIDALERFAFYAE
HHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
AKASFAIVRTSDPGPYGCFIFSKGVV
CCCEEEEEECCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA