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The map label for this gene is dppB [H]

Identifier: 222102661

GI number: 222102661

Start: 301750

End: 302670

Strand: Reverse

Name: dppB [H]

Synonym: Avi_7327

Alternate gene names: 222102661

Gene position: 302670-301750 (Counterclockwise)

Preceding gene: 222102662

Following gene: 222102660

Centisome position: 47.91

GC content: 57.55

Gene sequence:

>921_bases
ATGTTCAATTATTTTCTCAAGCGCCTGTTCGGGCTGCTGCCCACACTTCTGATCGTTGCCGTTCTGGTGTTTCTGTTTGT
GCATATGCTGCCGGGTGATCCGGCGCGCCTTGCGGCAGGGCAGGATGCGGACGAGCAGACCGTGGCGCTGGTGCGCAGCG
AACTGGGCCTCGACAAGCCCCTACCCCAGCAATTTGTCGAGTATTTCACACGAATGTTGCATGGCGACCTTGGGGTGTCG
ATCCGCACCCATCGCCCGGTGTCTGTTGAAATTGGCGAGCGCTTCATGCCCACCATGCTGCTGACGCTGACCAGCATGAT
CTGGTCGGTGTCCGTTGGCATGATCATTGGCGTCTTTTCTGCCGTGTTTCGCAACCGCTGGCCGGATAGATTGGGCATGA
CCGTGGCCGTGTCTGGCATTTCCTTTCCGGCCTTTGCGCTGGGCATGTTGCTGATGCAGATTTTCTCGGTCTGGCTCGGA
TGGCTGCCCACCGTGGGGGCCGATAGCTGGCGGCATTACATCCTGCCATCGATAACGCTGGGCGCAGGCGTTGCCGCTGT
CATGGCCCGCTTTACCCGAGCCGCCTTTGTAGATGTGATTCAGGAAGATTTTGTGCGCACCGCCCGCGCCAAGGGGCTGA
ATGAAAAAGTGGTGATTGCCAAACATTGCCTGCGCAACGCGCTGATCCCGATTGTCACCATGATGGGCCTGCAATTCGGC
TTTCTGCTGGGCGGCTCCATTGTGGTGGAGGCGGTGTTCAACTGGCCGGGTGTTGGCCGTTTGCTGGTCGATGCGGTGAA
CCAGCGGGATTATCCGGTAATTCAGGCCCTCGTGCTGATGTTCTCGCTGGAATTCATCCTGATCAATCTTGTCGTGGATC
TGCTCTACGGCGTCATCAATCCGACAATCCGTTATAAATGA

Upstream 100 bases:

>100_bases
CGCCGAGACACTCCTTTTACGCATTTCCGAACGCAAAACCGCGATACACTTTTGCTGGAAATGCTTCCAACCCCTCCTGA
AGGCTTTCGCTGCGGTTGCC

Downstream 100 bases:

>100_bases
GCCGGCCATGAGCAATACCACATCTGCCCCAATTGCCGCCGCTGCACAGACCAGCCGCGCTGTTCGCACCCCTTGGAGCG
AATTTTGGCGCAAATTCAAA

Product: ABC transporter membrane spanning protein (dipeptide)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MFNYFLKRLFGLLPTLLIVAVLVFLFVHMLPGDPARLAAGQDADEQTVALVRSELGLDKPLPQQFVEYFTRMLHGDLGVS
IRTHRPVSVEIGERFMPTMLLTLTSMIWSVSVGMIIGVFSAVFRNRWPDRLGMTVAVSGISFPAFALGMLLMQIFSVWLG
WLPTVGADSWRHYILPSITLGAGVAAVMARFTRAAFVDVIQEDFVRTARAKGLNEKVVIAKHCLRNALIPIVTMMGLQFG
FLLGGSIVVEAVFNWPGVGRLLVDAVNQRDYPVIQALVLMFSLEFILINLVVDLLYGVINPTIRYK

Sequences:

>Translated_306_residues
MFNYFLKRLFGLLPTLLIVAVLVFLFVHMLPGDPARLAAGQDADEQTVALVRSELGLDKPLPQQFVEYFTRMLHGDLGVS
IRTHRPVSVEIGERFMPTMLLTLTSMIWSVSVGMIIGVFSAVFRNRWPDRLGMTVAVSGISFPAFALGMLLMQIFSVWLG
WLPTVGADSWRHYILPSITLGAGVAAVMARFTRAAFVDVIQEDFVRTARAKGLNEKVVIAKHCLRNALIPIVTMMGLQFG
FLLGGSIVVEAVFNWPGVGRLLVDAVNQRDYPVIQALVLMFSLEFILINLVVDLLYGVINPTIRYK
>Mature_306_residues
MFNYFLKRLFGLLPTLLIVAVLVFLFVHMLPGDPARLAAGQDADEQTVALVRSELGLDKPLPQQFVEYFTRMLHGDLGVS
IRTHRPVSVEIGERFMPTMLLTLTSMIWSVSVGMIIGVFSAVFRNRWPDRLGMTVAVSGISFPAFALGMLLMQIFSVWLG
WLPTVGADSWRHYILPSITLGAGVAAVMARFTRAAFVDVIQEDFVRTARAKGLNEKVVIAKHCLRNALIPIVTMMGLQFG
FLLGGSIVVEAVFNWPGVGRLLVDAVNQRDYPVIQALVLMFSLEFILINLVVDLLYGVINPTIRYK

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=72.5490196078431, Blast_Score=461, Evalue=1e-131,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=41.4201183431953, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1789888, Length=308, Percent_Identity=38.3116883116883, Blast_Score=214, Evalue=8e-57,
Organism=Escherichia coli, GI1787761, Length=305, Percent_Identity=37.3770491803279, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI1787497, Length=309, Percent_Identity=32.3624595469256, Blast_Score=178, Evalue=5e-46,
Organism=Escherichia coli, GI1787550, Length=275, Percent_Identity=31.2727272727273, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=24.3093922651934, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34027; Mature: 34027

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNYFLKRLFGLLPTLLIVAVLVFLFVHMLPGDPARLAAGQDADEQTVALVRSELGLDKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCC
LPQQFVEYFTRMLHGDLGVSIRTHRPVSVEIGERFMPTMLLTLTSMIWSVSVGMIIGVFS
CHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFRNRWPDRLGMTVAVSGISFPAFALGMLLMQIFSVWLGWLPTVGADSWRHYILPSITL
HHHHCCCCHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHH
GAGVAAVMARFTRAAFVDVIQEDFVRTARAKGLNEKVVIAKHCLRNALIPIVTMMGLQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLLGGSIVVEAVFNWPGVGRLLVDAVNQRDYPVIQALVLMFSLEFILINLVVDLLYGVIN
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PTIRYK
CCCCCC
>Mature Secondary Structure
MFNYFLKRLFGLLPTLLIVAVLVFLFVHMLPGDPARLAAGQDADEQTVALVRSELGLDKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCC
LPQQFVEYFTRMLHGDLGVSIRTHRPVSVEIGERFMPTMLLTLTSMIWSVSVGMIIGVFS
CHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFRNRWPDRLGMTVAVSGISFPAFALGMLLMQIFSVWLGWLPTVGADSWRHYILPSITL
HHHHCCCCHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHH
GAGVAAVMARFTRAAFVDVIQEDFVRTARAKGLNEKVVIAKHCLRNALIPIVTMMGLQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLLGGSIVVEAVFNWPGVGRLLVDAVNQRDYPVIQALVLMFSLEFILINLVVDLLYGVIN
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PTIRYK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA