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The map label for this gene is 222102611

Identifier: 222102611

GI number: 222102611

Start: 218712

End: 219026

Strand: Reverse

Name: 222102611

Synonym: Avi_7263

Alternate gene names: NA

Gene position: 219026-218712 (Counterclockwise)

Preceding gene: 222102613

Following gene: 222102609

Centisome position: 34.67

GC content: 53.97

Gene sequence:

>315_bases
GTGTTTGTGAGAACGGACCTTGTTCCAGCCCCCTATGGCGCGGCAAAGCGCGACATCATGCCCGACGTCGAGCATCGCTC
GCACAAAGGACTGAACAATCGGGCGGAGAATTCCCATCAACCGACCCGGCGACGAGAACGGATCATGAAGGGCTTCAAAT
CAGCGCGACATCTCCAGCGTTTTGTTTCAATTCATGACCCTGTCGCCAACCTTTTTCACATTCCACGCCACGAGATCTCA
TCAGACAATCATCGCGAACTGAGAACCCGAGCCATGCAGATGTGGAACGAAATCGCATGCCTGCAAACCGCATAA

Upstream 100 bases:

>100_bases
TCGGAGCTTGTCGACAGCCCGGTAAAGATATGCCCGGCTGTTGCGAACCTTCACATAGGTTTTGTCAACGCGACAGCTTT
TTGATTGCGGTGGGCGCTAG

Downstream 100 bases:

>100_bases
GCGAAAGCCGAGCGCAATATTTTTGACCCGTGTCGGTTAACTTTACGGTGCCAATTTAACAGGTAAATCCGCTGTCATGT
TATCAGGCACAACATACAAT

Product: transposase

Products: NA

Alternate protein names: IS6 Family Transposase; Integrase Core Domain Protein; Integrase Catalytic Region; Transposase Protein; Transposase-Related Protein

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MFVRTDLVPAPYGAAKRDIMPDVEHRSHKGLNNRAENSHQPTRRRERIMKGFKSARHLQRFVSIHDPVANLFHIPRHEIS
SDNHRELRTRAMQMWNEIACLQTA

Sequences:

>Translated_104_residues
MFVRTDLVPAPYGAAKRDIMPDVEHRSHKGLNNRAENSHQPTRRRERIMKGFKSARHLQRFVSIHDPVANLFHIPRHEIS
SDNHRELRTRAMQMWNEIACLQTA
>Mature_104_residues
MFVRTDLVPAPYGAAKRDIMPDVEHRSHKGLNNRAENSHQPTRRRERIMKGFKSARHLQRFVSIHDPVANLFHIPRHEIS
SDNHRELRTRAMQMWNEIACLQTA

Specific function: Unknown

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12233; Mature: 12233

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVRTDLVPAPYGAAKRDIMPDVEHRSHKGLNNRAENSHQPTRRRERIMKGFKSARHLQR
CCCCCCCCCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FVSIHDPVANLFHIPRHEISSDNHRELRTRAMQMWNEIACLQTA
HHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFVRTDLVPAPYGAAKRDIMPDVEHRSHKGLNNRAENSHQPTRRRERIMKGFKSARHLQR
CCCCCCCCCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FVSIHDPVANLFHIPRHEISSDNHRELRTRAMQMWNEIACLQTA
HHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA