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The map label for this gene is dapA [H]

Identifier: 222102608

GI number: 222102608

Start: 215959

End: 216870

Strand: Reverse

Name: dapA [H]

Synonym: Avi_7258

Alternate gene names: 222102608

Gene position: 216870-215959 (Counterclockwise)

Preceding gene: 222102609

Following gene: 222102607

Centisome position: 34.33

GC content: 56.25

Gene sequence:

>912_bases
ATGAAATTCGAAGGTATCTATACCCCGGCGGTGACACCGCTTGGGCCAGATGGGCAGATTGATCGTGAAGGCTTTGCCGC
CGTCCTTGAATCGCTCATCGAAGCGAAGGTTCATGGTATCATTGTCGGCGGTTCAACGGGTGAATATTACGCCCAGAGCG
CCCAAGAGCGCCTTGATCTTGCGGCCCATGCAAAAGATGTGATCGGAACCAGAATTCCGCTGATCATCGGCACGGGCGCA
ACCAGAACGGAAGATTCCGTGGCCTACGCCATTGCTGCCAAAGACATTGGTGCTGACGCCATCCTGGTGTCGTCTCCGCC
CTATGCGCTGCCAACGGAGCGCGAGAACGCTGTTCATGCGCTGACGGTAGATCGCGCCGCCAACCTGCCGATCATGCTCT
ACAACTATCCAGCCCGTATGGGTGTGGTGATGGGAGATGAATATTTTTCCCGGGTTGGCAAATCCAAAAATGTCGTGGCG
ATCAAGGAAAGCTCTGGCGACATGGCCAACCTTCACCTTCTGGCCCGGAAGTTTCCTCATATCGGCCTGTCTTGTGGATG
GGACGACCAGGCGCTCGAATTCTTCGCCTGGGGAGCAAAAAGCTGGGTCTGCGCTGGCTCGAACTTCCTGCCGCGCGAGC
ATGTCGCGCTTTATGAAGCCTGCGTTCTGGAGAAGAATTTCGACAAGGGCCGCGCGATCATGACCGCGATGCTGCCGCTG
ATGGATTTTCTCGAATGCGGTAAATTCGTTCAGTCGATCAAATATGGCTGTGAACTGATCGGCCTGAAGACCGGCTCGGT
ACGCGCACCGCTACGGCCGCTGAACGCCGAAGAAAAAAGAACCCTTGAGACCGTCGTCACGACTGTGAAGCGCACGGTTG
CCCAGATCACCTCGGGAGCCAACAATGCATGA

Upstream 100 bases:

>100_bases
GGGAATTGTCACGCGAGAACATGGAAATGTTCATCGCTCCCCAAGCGCTTAAGGCGGACGCATTGGTCGATACGCCAATG
CAATCGATGGAGAAATCATC

Downstream 100 bases:

>100_bases
ACCTTTGACCGTGGCCGAATACAAGGCCATCGCTGCCAGTCTTCAATTGCCGACCAACGCTTTCATCGACGGTGCGTTTC
GTCCGGCAAAGTCCGGCAAG

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKFEGIYTPAVTPLGPDGQIDREGFAAVLESLIEAKVHGIIVGGSTGEYYAQSAQERLDLAAHAKDVIGTRIPLIIGTGA
TRTEDSVAYAIAAKDIGADAILVSSPPYALPTERENAVHALTVDRAANLPIMLYNYPARMGVVMGDEYFSRVGKSKNVVA
IKESSGDMANLHLLARKFPHIGLSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMTAMLPL
MDFLECGKFVQSIKYGCELIGLKTGSVRAPLRPLNAEEKRTLETVVTTVKRTVAQITSGANNA

Sequences:

>Translated_303_residues
MKFEGIYTPAVTPLGPDGQIDREGFAAVLESLIEAKVHGIIVGGSTGEYYAQSAQERLDLAAHAKDVIGTRIPLIIGTGA
TRTEDSVAYAIAAKDIGADAILVSSPPYALPTERENAVHALTVDRAANLPIMLYNYPARMGVVMGDEYFSRVGKSKNVVA
IKESSGDMANLHLLARKFPHIGLSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMTAMLPL
MDFLECGKFVQSIKYGCELIGLKTGSVRAPLRPLNAEEKRTLETVVTTVKRTVAQITSGANNA
>Mature_303_residues
MKFEGIYTPAVTPLGPDGQIDREGFAAVLESLIEAKVHGIIVGGSTGEYYAQSAQERLDLAAHAKDVIGTRIPLIIGTGA
TRTEDSVAYAIAAKDIGADAILVSSPPYALPTERENAVHALTVDRAANLPIMLYNYPARMGVVMGDEYFSRVGKSKNVVA
IKESSGDMANLHLLARKFPHIGLSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMTAMLPL
MDFLECGKFVQSIKYGCELIGLKTGSVRAPLRPLNAEEKRTLETVVTTVKRTVAQITSGANNA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=292, Percent_Identity=25.3424657534247, Blast_Score=89, Evalue=5e-18,
Organism=Escherichia coli, GI1786463, Length=287, Percent_Identity=31.3588850174216, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI87082415, Length=268, Percent_Identity=28.7313432835821, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1788823, Length=287, Percent_Identity=26.8292682926829, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1789620, Length=197, Percent_Identity=29.4416243654822, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 32707; Mature: 32707

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFEGIYTPAVTPLGPDGQIDREGFAAVLESLIEAKVHGIIVGGSTGEYYAQSAQERLDL
CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHH
AAHAKDVIGTRIPLIIGTGATRTEDSVAYAIAAKDIGADAILVSSPPYALPTERENAVHA
HHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCEEE
LTVDRAANLPIMLYNYPARMGVVMGDEYFSRVGKSKNVVAIKESSGDMANLHLLARKFPH
EEECCCCCCCEEEEECCCCEEEEECHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCC
IGLSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMTAMLPL
CCCCCCCCHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MDFLECGKFVQSIKYGCELIGLKTGSVRAPLRPLNAEEKRTLETVVTTVKRTVAQITSGA
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
NNA
CCC
>Mature Secondary Structure
MKFEGIYTPAVTPLGPDGQIDREGFAAVLESLIEAKVHGIIVGGSTGEYYAQSAQERLDL
CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHH
AAHAKDVIGTRIPLIIGTGATRTEDSVAYAIAAKDIGADAILVSSPPYALPTERENAVHA
HHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCEEE
LTVDRAANLPIMLYNYPARMGVVMGDEYFSRVGKSKNVVAIKESSGDMANLHLLARKFPH
EEECCCCCCCEEEEECCCCEEEEECHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCC
IGLSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMTAMLPL
CCCCCCCCHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MDFLECGKFVQSIKYGCELIGLKTGSVRAPLRPLNAEEKRTLETVVTTVKRTVAQITSGA
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
NNA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA