| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is yxeK [H]
Identifier: 222102573
GI number: 222102573
Start: 178062
End: 179063
Strand: Direct
Name: yxeK [H]
Synonym: Avi_7209
Alternate gene names: 222102573
Gene position: 178062-179063 (Clockwise)
Preceding gene: 222102572
Following gene: 222102574
Centisome position: 28.18
GC content: 59.68
Gene sequence:
>1002_bases ATGACACAGACACATCCTTTGCTCTTGGGCATTGGCGTTGATGCCGCAGCCCGCGACAGCAACAGGCCAACAGATTGGCA GGGGTTCTGGCGTGCGCTGATTGCACGCCTCGATGGCGCAGCCAGCTTCCTGACGCTGGAAGATGGCTTTGCCCGCGCCG ACGATGGGTTGGATGCTGTGCTGCTTGCCAATTGGCTTGGTGCGCGCAGTCACAGAATTGGCATTATTGCTGGCGCTGCG GTGAATTTTCTGGAGCCTTTCCATGTCTCCACCGCCATCGCCACGCTGGATTACGTCACGCAAGGTCGGGCCGGGCTTTT GCATCAGCGTCTCGACCAGACAAGGGCAGAGCAAGCAGGCCGCGCTATTGGACGCTTAAACGGCTTTCCCGCCATTGCCG CGCATGATCTTGATCGCGACGCGATTGATGCCGGTGAGGTCATTCGCAGGCTTTGGGACAGTTGGGAAGACGATACGGTG ATCCGTGATCCTGTGAGCCAGCGCTTTCTGGATGGCGCAAAGCTGCATTATATCAACTTTGAAAGCCCGAATTTCCGGGT GCTTGGTCCGTCGATTACGCCTCGCCCGCCACAAGGCCAGCCAGTGGTGGCGGTGTCATGGACAGGCACGGAGGATATTG CCTTGGCAAAGGCGGCGGATGTCGTTTTCGTGTCTGGCGATAATGATCGGATTGCGGAGCTTGCGGCACAGATTAACGGC GGCTCCACGACAGCCGGGCCGGTTCTGGTCGCTGATATTGCCGTGGGTGCCACTCCCTTGTCCGGCGCGGAGGCCGTTGA GCGGCTGACGCAAACGGCAACAGCAGGATTTGGCGCTGTGCGTCTGGTGTTGTCCGATCCCCAAACGCAGATCGACCATG TGCTGCATGAGATATTGCCCGCCCTGGGGAGCGCAGGTCTTGTGCGCGAGCCTTCAGGTAACACACTACGCGCCCGGTTT GGATTGCCCACAGCCATCAATCGCACCGCCACCGCTGCTTGA
Upstream 100 bases:
>100_bases TTTTGCCCAGCTTATTCCGGCACAGGGCAAGCGCAAATCGAAACTCAGCCTCGCGGCTGGCTAAGGCAATCCCTCATCAA TTGAAAACTGGATCAAAACC
Downstream 100 bases:
>100_bases ATTGAGAGAGATAAGTTCATGGCCCAAAAACAGATCATCCTCGGAGCGCAATTTCCGGGCGTCAACAATTTCACCGTCTG GAGTGATCCGGCAGCGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTQTHPLLLGIGVDAAARDSNRPTDWQGFWRALIARLDGAASFLTLEDGFARADDGLDAVLLANWLGARSHRIGIIAGAA VNFLEPFHVSTAIATLDYVTQGRAGLLHQRLDQTRAEQAGRAIGRLNGFPAIAAHDLDRDAIDAGEVIRRLWDSWEDDTV IRDPVSQRFLDGAKLHYINFESPNFRVLGPSITPRPPQGQPVVAVSWTGTEDIALAKAADVVFVSGDNDRIAELAAQING GSTTAGPVLVADIAVGATPLSGAEAVERLTQTATAGFGAVRLVLSDPQTQIDHVLHEILPALGSAGLVREPSGNTLRARF GLPTAINRTATAA
Sequences:
>Translated_333_residues MTQTHPLLLGIGVDAAARDSNRPTDWQGFWRALIARLDGAASFLTLEDGFARADDGLDAVLLANWLGARSHRIGIIAGAA VNFLEPFHVSTAIATLDYVTQGRAGLLHQRLDQTRAEQAGRAIGRLNGFPAIAAHDLDRDAIDAGEVIRRLWDSWEDDTV IRDPVSQRFLDGAKLHYINFESPNFRVLGPSITPRPPQGQPVVAVSWTGTEDIALAKAADVVFVSGDNDRIAELAAQING GSTTAGPVLVADIAVGATPLSGAEAVERLTQTATAGFGAVRLVLSDPQTQIDHVLHEILPALGSAGLVREPSGNTLRARF GLPTAINRTATAA >Mature_332_residues TQTHPLLLGIGVDAAARDSNRPTDWQGFWRALIARLDGAASFLTLEDGFARADDGLDAVLLANWLGARSHRIGIIAGAAV NFLEPFHVSTAIATLDYVTQGRAGLLHQRLDQTRAEQAGRAIGRLNGFPAIAAHDLDRDAIDAGEVIRRLWDSWEDDTVI RDPVSQRFLDGAKLHYINFESPNFRVLGPSITPRPPQGQPVVAVSWTGTEDIALAKAADVVFVSGDNDRIAELAAQINGG STTAGPVLVADIAVGATPLSGAEAVERLTQTATAGFGAVRLVLSDPQTQIDHVLHEILPALGSAGLVREPSGNTLRARFG LPTAINRTATAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR016215 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 35302; Mature: 35171
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTHPLLLGIGVDAAARDSNRPTDWQGFWRALIARLDGAASFLTLEDGFARADDGLDAV CCCCCCEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH LLANWLGARSHRIGIIAGAAVNFLEPFHVSTAIATLDYVTQGRAGLLHQRLDQTRAEQAG HHHHHHCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RAIGRLNGFPAIAAHDLDRDAIDAGEVIRRLWDSWEDDTVIRDPVSQRFLDGAKLHYINF HHHHHCCCCCCCHHCCCCCHHCCHHHHHHHHHCCCCCCCEECCCHHHHHCCCCEEEEEEE ESPNFRVLGPSITPRPPQGQPVVAVSWTGTEDIALAKAADVVFVSGDNDRIAELAAQING CCCCEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCEEEEECCCHHHHHHHHHCCC GSTTAGPVLVADIAVGATPLSGAEAVERLTQTATAGFGAVRLVLSDPQTQIDHVLHEILP CCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH ALGSAGLVREPSGNTLRARFGLPTAINRTATAA HHCCCCEEECCCCCEEEEECCCCHHCCCCCCCC >Mature Secondary Structure TQTHPLLLGIGVDAAARDSNRPTDWQGFWRALIARLDGAASFLTLEDGFARADDGLDAV CCCCCEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH LLANWLGARSHRIGIIAGAAVNFLEPFHVSTAIATLDYVTQGRAGLLHQRLDQTRAEQAG HHHHHHCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RAIGRLNGFPAIAAHDLDRDAIDAGEVIRRLWDSWEDDTVIRDPVSQRFLDGAKLHYINF HHHHHCCCCCCCHHCCCCCHHCCHHHHHHHHHCCCCCCCEECCCHHHHHCCCCEEEEEEE ESPNFRVLGPSITPRPPQGQPVVAVSWTGTEDIALAKAADVVFVSGDNDRIAELAAQING CCCCEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCEEEEECCCHHHHHHHHHCCC GSTTAGPVLVADIAVGATPLSGAEAVERLTQTATAGFGAVRLVLSDPQTQIDHVLHEILP CCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH ALGSAGLVREPSGNTLRARFGLPTAINRTATAA HHCCCCEEECCCCCEEEEECCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]