| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
Click here to switch to the map view.
The map label for this gene is yhbW [C]
Identifier: 222102572
GI number: 222102572
Start: 177000
End: 178025
Strand: Direct
Name: yhbW [C]
Synonym: Avi_7208
Alternate gene names: 222102572
Gene position: 177000-178025 (Clockwise)
Preceding gene: 222102571
Following gene: 222102573
Centisome position: 28.02
GC content: 59.36
Gene sequence:
>1026_bases ATGCCTCTCTCCCATATCAAACATTTTGCCTTTCTCATTCCCGGCAGCTACCGGGAGGATAACCCGGCTGAGGGGCTGGA AGAAACGCTGCGCCTGTTCGAACTGGGTGAAGAACTGGGCTATGATAGCGCCTGGGTGCGCCAGCGCCATCTGGAGCGCG GTATTTCCTCTGCCTCAACCTTTCTGGCCGCCGCTTCGCAGCGCACATCCACCATTGGCCTTGGCACGGCGGTGATCCAG CTTGGCTATGAAAATCCGTTTCGTTTGGCGGAAGACCTAGCCACTGTGGATGGCCTGTCACGCGGGCGGTTGAATGTTGG CGTTTCGGTCGGCGCGCCACCCTTTGCTCATCTGATTGCGCCGTTTACCGATGCGGCGCCCGAGACTGATTATTCGCATG CACGGGCCGAAAAACTGGCCCTTGCCCTGCAATCAAAACCCCTTTCGGAAGAAACTTTGGCAGGCAATGCCGCCGGTGCG CAAATTCCGCGTGTGAGGCCGCTGGCACCTGGGCTGACAGATCGTTTGTGGTACGGCGGTGGCTCGCAGAAATCGGCCCG CTGGGCAGGGGAAACCGGCTTCAATCTGTTGAGCGGCAATATCATTACCGGTGAGCAGACCGATGATTTTCTGACTGCCC AGCGGGCTTTGATCGAGACATTCCGCCAGAATTGGCAACACGAGCGCGCACCGCGGGTTGCCCTTGGGCGCGTGATCTTG CCAACCGACAGCGCCAGCCCGGAAACCCGCCGCCGCTACGCGGAGTTTGTGGAGGAGCGCAACAAGCGCACCCATGCCCC CCAAGGCCCACGCCGCACGCTGATTCTGCCCGATGTGGTTGGCACAACGCCGGAGATTATCGAGATCTTGTCGCGTGATC CTGTTCTGCCACTGGTGTCGGAATTCCGGCTGGAACTGCCTTACGATTTTCATGCCGAGGAGTATGCGCAGATCATTGAG GATTTTGCCCAGCTTATTCCGGCACAGGGCAAGCGCAAATCGAAACTCAGCCTCGCGGCTGGCTAA
Upstream 100 bases:
>100_bases AAATCACGGCCCGTCTTGCCCGCTTTGAAGTCACAGCGGCCTGATTGCCCACGCACCCCATCTGCCAAGCTGACAATCGA ATTTCCTCTGGAGCCCTATG
Downstream 100 bases:
>100_bases GGCAATCCCTCATCAATTGAAAACTGGATCAAAACCATGACACAGACACATCCTTTGCTCTTGGGCATTGGCGTTGATGC CGCAGCCCGCGACAGCAACA
Product: monooxygenase
Products: NA
Alternate protein names: Luciferase-Like Monooxygenase; Luciferase Family Protein; Luciferase-Like Subgroup; Luciferase-Like Protein; Oxidoreductase Protein; Alkanal Monooxygenase; Flavin-Dependent Oxidoreductase; Luciferase-Like; Bacterial Luciferase; Alkanal Monooxygenase Alpha Chain; Luciferase; LuxA-Related Protein; Limonene Monooxygenase; Luciferase-Like Monooxygenase Protein; Fmn Dependent Monooxygenase; Monooxigenase; Luciferase-Alpha Subunit; Alkanal Monooxygenase-Like Protein; Monooxygenase FMN Dependent; Alkanal Monooxygenase Like Protein; LOW QUALITY PROTEIN Oxidoreductase
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPLSHIKHFAFLIPGSYREDNPAEGLEETLRLFELGEELGYDSAWVRQRHLERGISSASTFLAAASQRTSTIGLGTAVIQ LGYENPFRLAEDLATVDGLSRGRLNVGVSVGAPPFAHLIAPFTDAAPETDYSHARAEKLALALQSKPLSEETLAGNAAGA QIPRVRPLAPGLTDRLWYGGGSQKSARWAGETGFNLLSGNIITGEQTDDFLTAQRALIETFRQNWQHERAPRVALGRVIL PTDSASPETRRRYAEFVEERNKRTHAPQGPRRTLILPDVVGTTPEIIEILSRDPVLPLVSEFRLELPYDFHAEEYAQIIE DFAQLIPAQGKRKSKLSLAAG
Sequences:
>Translated_341_residues MPLSHIKHFAFLIPGSYREDNPAEGLEETLRLFELGEELGYDSAWVRQRHLERGISSASTFLAAASQRTSTIGLGTAVIQ LGYENPFRLAEDLATVDGLSRGRLNVGVSVGAPPFAHLIAPFTDAAPETDYSHARAEKLALALQSKPLSEETLAGNAAGA QIPRVRPLAPGLTDRLWYGGGSQKSARWAGETGFNLLSGNIITGEQTDDFLTAQRALIETFRQNWQHERAPRVALGRVIL PTDSASPETRRRYAEFVEERNKRTHAPQGPRRTLILPDVVGTTPEIIEILSRDPVLPLVSEFRLELPYDFHAEEYAQIIE DFAQLIPAQGKRKSKLSLAAG >Mature_340_residues PLSHIKHFAFLIPGSYREDNPAEGLEETLRLFELGEELGYDSAWVRQRHLERGISSASTFLAAASQRTSTIGLGTAVIQL GYENPFRLAEDLATVDGLSRGRLNVGVSVGAPPFAHLIAPFTDAAPETDYSHARAEKLALALQSKPLSEETLAGNAAGAQ IPRVRPLAPGLTDRLWYGGGSQKSARWAGETGFNLLSGNIITGEQTDDFLTAQRALIETFRQNWQHERAPRVALGRVILP TDSASPETRRRYAEFVEERNKRTHAPQGPRRTLILPDVVGTTPEIIEILSRDPVLPLVSEFRLELPYDFHAEEYAQIIED FAQLIPAQGKRKSKLSLAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37511; Mature: 37380
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSHIKHFAFLIPGSYREDNPAEGLEETLRLFELGEELGYDSAWVRQRHLERGISSAST CCHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FLAAASQRTSTIGLGTAVIQLGYENPFRLAEDLATVDGLSRGRLNVGVSVGAPPFAHLIA HHHHHHHCCCHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH PFTDAAPETDYSHARAEKLALALQSKPLSEETLAGNAAGAQIPRVRPLAPGLTDRLWYGG HHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHEECC GSQKSARWAGETGFNLLSGNIITGEQTDDFLTAQRALIETFRQNWQHERAPRVALGRVIL CCCCCCCCCCCCCCEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEE PTDSASPETRRRYAEFVEERNKRTHAPQGPRRTLILPDVVGTTPEIIEILSRDPVLPLVS CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHCCCHHHHHHHHCCCCCHHHH EFRLELPYDFHAEEYAQIIEDFAQLIPAQGKRKSKLSLAAG HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PLSHIKHFAFLIPGSYREDNPAEGLEETLRLFELGEELGYDSAWVRQRHLERGISSAST CHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FLAAASQRTSTIGLGTAVIQLGYENPFRLAEDLATVDGLSRGRLNVGVSVGAPPFAHLIA HHHHHHHCCCHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH PFTDAAPETDYSHARAEKLALALQSKPLSEETLAGNAAGAQIPRVRPLAPGLTDRLWYGG HHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHEECC GSQKSARWAGETGFNLLSGNIITGEQTDDFLTAQRALIETFRQNWQHERAPRVALGRVIL CCCCCCCCCCCCCCEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEE PTDSASPETRRRYAEFVEERNKRTHAPQGPRRTLILPDVVGTTPEIIEILSRDPVLPLVS CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHCCCHHHHHHHHCCCCCHHHH EFRLELPYDFHAEEYAQIIEDFAQLIPAQGKRKSKLSLAAG HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA