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The map label for this gene is ssuC [H]

Identifier: 222102563

GI number: 222102563

Start: 163831

End: 164649

Strand: Reverse

Name: ssuC [H]

Synonym: Avi_7197

Alternate gene names: 222102563

Gene position: 164649-163831 (Counterclockwise)

Preceding gene: 222102564

Following gene: 222102562

Centisome position: 26.06

GC content: 56.17

Gene sequence:

>819_bases
ATGGCATCCGTTGCAGAACTTCTGGTTCCCCATGCGGGAACAAGACAGATCAAAATCCCAAAGAGTGTCACATCGCTCTT
GCTGGCACTGGTGCTGCCGTTCGCTCTCCTGTTGCTGTGGTGGCTGACCTCTGTTCAGGGGTGGCTGCCGGAACAGATTT
TACCCGCACCCCGCTATGTCTATGAAACAGCCAGCAATCTGATTGGTGATGGAGAATTGCTCTATCACACCGGGGTTAGC
CTGCGGCGCGTTGTGATCGGCTTTACCATCGGGGCCAGTCTTGGCCTGTCGCTTGGCGTGTTGATGGGCCTATCCCCGCG
GGCTGAAGATTATATCAAACCGTTGTTTCTGGCGCTTGCGCAAATCCCCACGCTGGGCTGGATTCCCCTGCTGATGTTGC
TGGTCGGCATTGAAGAAACGCTGAAAATCATCATCATCGCCAAGGGCGCGTTTGTGCCTGTGACGCTCAATACCTTTTCC
GGCATCCGCAATGTTTCCGTGAAATATCGGGAGATTGGCCGCAGTTTTCGCTTCAGCCCTTGGCAGCAACTTCGGCTGAT
TGTGCTGCCCGCTGCCGCTCCAACCATTTTCACCGGCATTCGCTATGGCCTGACCAATGCATGGACCTCTCTGGTGGGGG
TTGAACTGCTGGCCTCATCCGAGGGCCTTGGCTATCTGCTGGTCTGGGGTCGGCAAATGTTTTGGCTGGATACGGTCATT
GTGGCCATGGTGGTGATCGGGCTGGTTGGTTTTATCATGGATCGCGGCTTGCGGCGCACCGAAAACCTGCTGCAACGCTG
GAAGCAGGAGGAGGCGTGA

Upstream 100 bases:

>100_bases
ACAGCTCTTTTGAACGCCTTGGCCTGAAAACCTTTTGGAAGGCCTATGGCGCAGACGGCAAGCCGAGCGCGTCTTAAAAC
ACGAGAAGGAGGCGCGAACG

Downstream 100 bases:

>100_bases
TCATGGCGCAGACAGCATCCTCTCATTCTGCCGTGAACTGGACCCGTGTTCGGCGCGGCGTTGTTCTGCCTTTGCTGTTG
CTGCTGATCTGGGAGATTTC

Product: ABC transporter membrane spanning protein (aliphatic sulphonate)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MASVAELLVPHAGTRQIKIPKSVTSLLLALVLPFALLLLWWLTSVQGWLPEQILPAPRYVYETASNLIGDGELLYHTGVS
LRRVVIGFTIGASLGLSLGVLMGLSPRAEDYIKPLFLALAQIPTLGWIPLLMLLVGIEETLKIIIIAKGAFVPVTLNTFS
GIRNVSVKYREIGRSFRFSPWQQLRLIVLPAAAPTIFTGIRYGLTNAWTSLVGVELLASSEGLGYLLVWGRQMFWLDTVI
VAMVVIGLVGFIMDRGLRRTENLLQRWKQEEA

Sequences:

>Translated_272_residues
MASVAELLVPHAGTRQIKIPKSVTSLLLALVLPFALLLLWWLTSVQGWLPEQILPAPRYVYETASNLIGDGELLYHTGVS
LRRVVIGFTIGASLGLSLGVLMGLSPRAEDYIKPLFLALAQIPTLGWIPLLMLLVGIEETLKIIIIAKGAFVPVTLNTFS
GIRNVSVKYREIGRSFRFSPWQQLRLIVLPAAAPTIFTGIRYGLTNAWTSLVGVELLASSEGLGYLLVWGRQMFWLDTVI
VAMVVIGLVGFIMDRGLRRTENLLQRWKQEEA
>Mature_271_residues
ASVAELLVPHAGTRQIKIPKSVTSLLLALVLPFALLLLWWLTSVQGWLPEQILPAPRYVYETASNLIGDGELLYHTGVSL
RRVVIGFTIGASLGLSLGVLMGLSPRAEDYIKPLFLALAQIPTLGWIPLLMLLVGIEETLKIIIIAKGAFVPVTLNTFSG
IRNVSVKYREIGRSFRFSPWQQLRLIVLPAAAPTIFTGIRYGLTNAWTSLVGVELLASSEGLGYLLVWGRQMFWLDTVIV
AMVVIGLVGFIMDRGLRRTENLLQRWKQEEA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=237, Percent_Identity=36.7088607594937, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1786564, Length=240, Percent_Identity=30.8333333333333, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1789033, Length=162, Percent_Identity=31.4814814814815, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30090; Mature: 29959

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVAELLVPHAGTRQIKIPKSVTSLLLALVLPFALLLLWWLTSVQGWLPEQILPAPRYV
CCCHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHH
YETASNLIGDGELLYHTGVSLRRVVIGFTIGASLGLSLGVLMGLSPRAEDYIKPLFLALA
HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QIPTLGWIPLLMLLVGIEETLKIIIIAKGAFVPVTLNTFSGIRNVSVKYREIGRSFRFSP
HCCCCHHHHHHHHHHCHHHHEEEEEEECCCEEEEEEHHHCCHHHCHHHHHHHCCCCCCCH
WQQLRLIVLPAAAPTIFTGIRYGLTNAWTSLVGVELLASSEGLGYLLVWGRQMFWLDTVI
HHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH
VAMVVIGLVGFIMDRGLRRTENLLQRWKQEEA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASVAELLVPHAGTRQIKIPKSVTSLLLALVLPFALLLLWWLTSVQGWLPEQILPAPRYV
CCHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHH
YETASNLIGDGELLYHTGVSLRRVVIGFTIGASLGLSLGVLMGLSPRAEDYIKPLFLALA
HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QIPTLGWIPLLMLLVGIEETLKIIIIAKGAFVPVTLNTFSGIRNVSVKYREIGRSFRFSP
HCCCCHHHHHHHHHHCHHHHEEEEEEECCCEEEEEEHHHCCHHHCHHHHHHHCCCCCCCH
WQQLRLIVLPAAAPTIFTGIRYGLTNAWTSLVGVELLASSEGLGYLLVWGRQMFWLDTVI
HHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH
VAMVVIGLVGFIMDRGLRRTENLLQRWKQEEA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]