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The map label for this gene is ssuA [H]

Identifier: 222102564

GI number: 222102564

Start: 164673

End: 165746

Strand: Reverse

Name: ssuA [H]

Synonym: Avi_7198

Alternate gene names: 222102564

Gene position: 165746-164673 (Counterclockwise)

Preceding gene: 222102565

Following gene: 222102563

Centisome position: 26.23

GC content: 54.38

Gene sequence:

>1074_bases
ATGAAATCTGCCTTTCTTTTGCGTATCGCAACCAGCCTTGGTCTGCTGGCGCTTGTATCCGGCCCTTTGCAGGCGGCAGA
CCCTCTGGTGATCCATGTGGGCTACGCGGCGATCGGTGTCGATAATCGTCCCTTTGCCGAGGGAACATCGGCGGCCACGG
CCCGCGCTGGCGAATATCTCGAAAAAGAATTCGCCAATGATCCAAACGTCAAGATCGAATGGACCTTTTTCAAGGGTGCA
GGGCCAGCGGTGAATGAAGGCTTTGCCAACAACCAGCTGGATTTTGCCTATCAGGGCGATTTGCCTGCCATTATTGGCCG
CGCCAATGGGTTGAAAACCAAATTTTTGCTGGCAAGTGGCGCTAGAAAGCCGCTGTACCTGGCTGTTGCCAACGGATCGG
GGATCAAAACGGTTGAAGAGCTGAAAGGCAAAAAAGTCGCTTATCAACGCGGCACCAATGGCCATCTTGCTGCCGTCAAG
ATTCTGGAAGCCCACGGACTGAAAGAGCGCGATGTGCAGGTGATCAATCTGGATAGCGCAGGCACGGTTGCTGCCCTGAC
CAGCAAAGATATTGATGCTGCCTTTGGTGATACAGCCTTGATCAATCTGGCCGCCAACGGTTCTGCCGAGATTGTTTACA
CCACCAAGGGTGATGATCCGCGCTTTGGCCGCAACGCTGGCATTGTCGCGCGCGAAGCGTTTATCGACGCCCATCCAGAG
ATCACCCAGAAGGTGGTGGATGCCTTTGTGAAAGCCGCCAAATGGTCGTCAGATGAGCCAAACCGTGCCGCGCTTTTTGA
GCTGTGGCACAAATCCGGCACGCCCGTGCCAATCCTGGAAGATTATTTCAGCAACGACACTTTGGCCTATCGCAACGCGC
CACTGCTCGATGAGCTGCTGATTTCGCAATACAAGGAGCAGGCTGTGAAAAGCAAAGAGTTTGGCCTGATCCGCCGCGAT
GTCGATCTGAACGGCTGGTTTGAGCCGAAATATCTCAACAGCTCTTTTGAACGCCTTGGCCTGAAAACCTTTTGGAAGGC
CTATGGCGCAGACGGCAAGCCGAGCGCGTCTTAA

Upstream 100 bases:

>100_bases
CACTTTGGCGCAACCCGCCTTTTCCCACGGATAATATCAATTGGCTGCCCTTACCGCCGAAATACGCGATGTAGGTAGCC
TGACATGAACGGAGTTATTG

Downstream 100 bases:

>100_bases
AACACGAGAAGGAGGCGCGAACGATGGCATCCGTTGCAGAACTTCTGGTTCCCCATGCGGGAACAAGACAGATCAAAATC
CCAAAGAGTGTCACATCGCT

Product: ABC transporter substrate binding protein (aliphatic sulfonate)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MKSAFLLRIATSLGLLALVSGPLQAADPLVIHVGYAAIGVDNRPFAEGTSAATARAGEYLEKEFANDPNVKIEWTFFKGA
GPAVNEGFANNQLDFAYQGDLPAIIGRANGLKTKFLLASGARKPLYLAVANGSGIKTVEELKGKKVAYQRGTNGHLAAVK
ILEAHGLKERDVQVINLDSAGTVAALTSKDIDAAFGDTALINLAANGSAEIVYTTKGDDPRFGRNAGIVAREAFIDAHPE
ITQKVVDAFVKAAKWSSDEPNRAALFELWHKSGTPVPILEDYFSNDTLAYRNAPLLDELLISQYKEQAVKSKEFGLIRRD
VDLNGWFEPKYLNSSFERLGLKTFWKAYGADGKPSAS

Sequences:

>Translated_357_residues
MKSAFLLRIATSLGLLALVSGPLQAADPLVIHVGYAAIGVDNRPFAEGTSAATARAGEYLEKEFANDPNVKIEWTFFKGA
GPAVNEGFANNQLDFAYQGDLPAIIGRANGLKTKFLLASGARKPLYLAVANGSGIKTVEELKGKKVAYQRGTNGHLAAVK
ILEAHGLKERDVQVINLDSAGTVAALTSKDIDAAFGDTALINLAANGSAEIVYTTKGDDPRFGRNAGIVAREAFIDAHPE
ITQKVVDAFVKAAKWSSDEPNRAALFELWHKSGTPVPILEDYFSNDTLAYRNAPLLDELLISQYKEQAVKSKEFGLIRRD
VDLNGWFEPKYLNSSFERLGLKTFWKAYGADGKPSAS
>Mature_357_residues
MKSAFLLRIATSLGLLALVSGPLQAADPLVIHVGYAAIGVDNRPFAEGTSAATARAGEYLEKEFANDPNVKIEWTFFKGA
GPAVNEGFANNQLDFAYQGDLPAIIGRANGLKTKFLLASGARKPLYLAVANGSGIKTVEELKGKKVAYQRGTNGHLAAVK
ILEAHGLKERDVQVINLDSAGTVAALTSKDIDAAFGDTALINLAANGSAEIVYTTKGDDPRFGRNAGIVAREAFIDAHPE
ITQKVVDAFVKAAKWSSDEPNRAALFELWHKSGTPVPILEDYFSNDTLAYRNAPLLDELLISQYKEQAVKSKEFGLIRRD
VDLNGWFEPKYLNSSFERLGLKTFWKAYGADGKPSAS

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=141, Percent_Identity=34.7517730496454, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 38521; Mature: 38521

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAFLLRIATSLGLLALVSGPLQAADPLVIHVGYAAIGVDNRPFAEGTSAATARAGEYL
CCCEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECEEEEECCCCCCCCCCCHHHHHHHHHH
EKEFANDPNVKIEWTFFKGAGPAVNEGFANNQLDFAYQGDLPAIIGRANGLKTKFLLASG
HHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCEEEEEECC
ARKPLYLAVANGSGIKTVEELKGKKVAYQRGTNGHLAAVKILEAHGLKERDVQVINLDSA
CCCCEEEEEECCCCCCHHHHHCCCEEEEECCCCCCEEEEEEEHHCCCCCCCEEEEEECCC
GTVAALTSKDIDAAFGDTALINLAANGSAEIVYTTKGDDPRFGRNAGIVAREAFIDAHPE
CCEEEEECCCCCHHCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEHHHHCCCHH
ITQKVVDAFVKAAKWSSDEPNRAALFELWHKSGTPVPILEDYFSNDTLAYRNAPLLDELL
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCEEEECCCCHHHHHH
ISQYKEQAVKSKEFGLIRRDVDLNGWFEPKYLNSSFERLGLKTFWKAYGADGKPSAS
HHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKSAFLLRIATSLGLLALVSGPLQAADPLVIHVGYAAIGVDNRPFAEGTSAATARAGEYL
CCCEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECEEEEECCCCCCCCCCCHHHHHHHHHH
EKEFANDPNVKIEWTFFKGAGPAVNEGFANNQLDFAYQGDLPAIIGRANGLKTKFLLASG
HHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCEEEEEECC
ARKPLYLAVANGSGIKTVEELKGKKVAYQRGTNGHLAAVKILEAHGLKERDVQVINLDSA
CCCCEEEEEECCCCCCHHHHHCCCEEEEECCCCCCEEEEEEEHHCCCCCCCEEEEEECCC
GTVAALTSKDIDAAFGDTALINLAANGSAEIVYTTKGDDPRFGRNAGIVAREAFIDAHPE
CCEEEEECCCCCHHCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEHHHHCCCHH
ITQKVVDAFVKAAKWSSDEPNRAALFELWHKSGTPVPILEDYFSNDTLAYRNAPLLDELL
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCEEEECCCCHHHHHH
ISQYKEQAVKSKEFGLIRRDVDLNGWFEPKYLNSSFERLGLKTFWKAYGADGKPSAS
HHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]