| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is tauC [H]
Identifier: 222102537
GI number: 222102537
Start: 133570
End: 134355
Strand: Direct
Name: tauC [H]
Synonym: Avi_7166
Alternate gene names: 222102537
Gene position: 133570-134355 (Clockwise)
Preceding gene: 222102536
Following gene: 222102550
Centisome position: 21.14
GC content: 57.76
Gene sequence:
>786_bases ATGCGCGAGTTCGGCATTGGCCGAAAGCCGACGGTGTTGATCAGCGTGGTCACGGCGCTTGTGCTTTTATTTGCGTGGTG GCTGGTCTCAGCGCTGGGCGTGGTGCCGCATCTGTTTTTGCCGCGCCCAGATGAGGTTGTGCATCAATTTGTGGTCATTT TCAGCGATGGCTATGCGGGGGCATCGATTGGCGATCATGTGGGAGCCAGCCTGTTTCGCATCGGCGTGGCCGCCATTCTC GCCATTGCTGCGGGGATTCCGATTGGCTTGCTGATGGGCCTTAATCGTTGGGCCAAGGGCATTCTGGATACGCCCATCGA GTTTTACTGGCCTTTGCCGCCGCTCTCTTATCTTCCCCTGATGATCATCTGGCTGGGTATTGGCGAAACCTCGAAAATCA TGGTGTTGTTTCTGGCGATGTTTGCGCCGATCTGCCTCTCTGCACAGGCGGGCGTGAAGTCGGTGCCGATTGAGCGGGTG AATGCGGCGCGATCCTTGGGCGCAAACCGCTGGCAATTGTTCTCCAGCATTGTCTTTCCCTCGGCGCTGCCGGAAATTCT CACGGGCATCAGGATCGGACTTGGCATTGGTTGGGGCACGCTGGTGGCCGCTGAACTGATCGCGTCCACGCGCGGCATTG GCTATATGATCATGTCTGCGTCGCAGTTTCTGGCCACCGATGTCGTCTTTGTCGGTATCGCGATTATCTCTGTCTGCGCT TTTGCCTTTGGTGCCGCCATTCGCCTGTTGGAGCGCGTGCTTGTTCCCTGGAAGGGCAAGGCATAG
Upstream 100 bases:
>100_bases TGCACGCAACCCATTCTCCGAAAGAGGCTTTCGCATGACCTTGATCAGCAATGATGTGCGCCCCGTCGTGGTGCCAACAC CGGGTATCAAAACGGTGCGC
Downstream 100 bases:
>100_bases TTGCGGCCTCAAGAACGCTCTATAAAAACATCACGAAGTCCTGTTGAGATGGCCTTCGTGATGGTCTTGCTGTGAGCAGT CTTTATCCGCGAAGCAGAGG
Product: taurine uptake ABC transporter permease protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MREFGIGRKPTVLISVVTALVLLFAWWLVSALGVVPHLFLPRPDEVVHQFVVIFSDGYAGASIGDHVGASLFRIGVAAIL AIAAGIPIGLLMGLNRWAKGILDTPIEFYWPLPPLSYLPLMIIWLGIGETSKIMVLFLAMFAPICLSAQAGVKSVPIERV NAARSLGANRWQLFSSIVFPSALPEILTGIRIGLGIGWGTLVAAELIASTRGIGYMIMSASQFLATDVVFVGIAIISVCA FAFGAAIRLLERVLVPWKGKA
Sequences:
>Translated_261_residues MREFGIGRKPTVLISVVTALVLLFAWWLVSALGVVPHLFLPRPDEVVHQFVVIFSDGYAGASIGDHVGASLFRIGVAAIL AIAAGIPIGLLMGLNRWAKGILDTPIEFYWPLPPLSYLPLMIIWLGIGETSKIMVLFLAMFAPICLSAQAGVKSVPIERV NAARSLGANRWQLFSSIVFPSALPEILTGIRIGLGIGWGTLVAAELIASTRGIGYMIMSASQFLATDVVFVGIAIISVCA FAFGAAIRLLERVLVPWKGKA >Mature_261_residues MREFGIGRKPTVLISVVTALVLLFAWWLVSALGVVPHLFLPRPDEVVHQFVVIFSDGYAGASIGDHVGASLFRIGVAAIL AIAAGIPIGLLMGLNRWAKGILDTPIEFYWPLPPLSYLPLMIIWLGIGETSKIMVLFLAMFAPICLSAQAGVKSVPIERV NAARSLGANRWQLFSSIVFPSALPEILTGIRIGLGIGWGTLVAAELIASTRGIGYMIMSASQFLATDVVFVGIAIISVCA FAFGAAIRLLERVLVPWKGKA
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=250, Percent_Identity=53.6, Blast_Score=244, Evalue=6e-66, Organism=Escherichia coli, GI87081802, Length=233, Percent_Identity=34.7639484978541, Blast_Score=126, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27938; Mature: 27938
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREFGIGRKPTVLISVVTALVLLFAWWLVSALGVVPHLFLPRPDEVVHQFVVIFSDGYAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC ASIGDHVGASLFRIGVAAILAIAAGIPIGLLMGLNRWAKGILDTPIEFYWPLPPLSYLPL CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHH MIIWLGIGETSKIMVLFLAMFAPICLSAQAGVKSVPIERVNAARSLGANRWQLFSSIVFP HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH SALPEILTGIRIGLGIGWGTLVAAELIASTRGIGYMIMSASQFLATDVVFVGIAIISVCA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FAFGAAIRLLERVLVPWKGKA HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MREFGIGRKPTVLISVVTALVLLFAWWLVSALGVVPHLFLPRPDEVVHQFVVIFSDGYAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC ASIGDHVGASLFRIGVAAILAIAAGIPIGLLMGLNRWAKGILDTPIEFYWPLPPLSYLPL CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHH MIIWLGIGETSKIMVLFLAMFAPICLSAQAGVKSVPIERVNAARSLGANRWQLFSSIVFP HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH SALPEILTGIRIGLGIGWGTLVAAELIASTRGIGYMIMSASQFLATDVVFVGIAIISVCA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FAFGAAIRLLERVLVPWKGKA HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]