The gene/protein map for NC_011981 is currently unavailable.
Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

Click here to switch to the map view.

The map label for this gene is 222102531

Identifier: 222102531

GI number: 222102531

Start: 126525

End: 127853

Strand: Direct

Name: 222102531

Synonym: Avi_7159

Alternate gene names: NA

Gene position: 126525-127853 (Clockwise)

Preceding gene: 222102530

Following gene: 222102532

Centisome position: 20.03

GC content: 56.81

Gene sequence:

>1329_bases
ATGAAACGTTTTGTTATTGCTGCACTTTTTGCCAGCACCATCTTCTCGGCAAGCGCGCCAGCCTTTGCCGCAGATGTCAG
TCAGTACATTCCCCTGCCAACCTATCGCGTCGGGGCCTATGCCTCCTCCGGCGAACTGTGGTGGGCGGGAGAGCGCGACT
ATTTCCGCTATATCAACGAGGTGGAAGGCGGCGTTGAGGGCGTGAAGCTCAACTATGAAGAGTTTGAAACCGAATGGAGC
CCGGACCGCACCGTTGAAGTCTATGAGCGGGTCAAGGCGGGCAAGGACGGCTCGCCGCTGGCCTTCTTCTTCACCCACGG
CACCCCTGCCACCTATGCCCTGCTGGAAAAAGCCGCAGCCGACAAGATTCCGCTGATTGATCCCGCAGGCGGCAAGACGG
AAACCGTGGATGGAACGGTGTTTCCCTACGCCTTCCCGCTGCTGTTCAGCTATTACAGTCAGGCCTCTACCGGCATCAAT
TATATTGCCTCCAAGGTCGGCGGTCTTGATAAGCTGAAAGGCCTGAAGATCGCAACCCTCTATCACGATAGTGCCTATGG
CCGCGCCAGCCAGCCAGCAATTGAGCTTCTGGCCAAGAAATATGGCTTTGAGAATATTCAGATTCCGGTGGCCGATCCCG
GCAACGAACAGTCACCACAATGGCGCCAGATCCGCGAGCAAAAGCCGGATTGGGTTTTCCTGCGCACCTGGGGGGTCTCC
ACCGTTGTTGCCCTCAAGACGGCACAGCGCTTTGGCTTTCCAGCCGATCATATCATTGGTGATGTCTGGGCCGGATCAGA
GTCAGACGCGATCCCCGCAGGCGCTGCCGCCATCGGTTATTCAGCACTCGCACCTTATCCCGGCGGCACGGATTTTGAGA
TCCACAAACGCCTGAAGGCCGAGATCCTCGACAAGGGCAAATCCGATTTGCGCGATCCGAAACTGTTTGGTGCGGTCAAT
TACAATATCGGTCTCGTCAACGCGGCATTGGCGGTTGAGGCGCTACGCACCGGCTACAAGCATTTCGGCCCAAAGCCGCT
GAATGGTGAGCAAGGCCGCTGGGCCTTTGAGCATCTGACCATTGATGACAAGCGGTTGGAGCAAATCGGTTTCAAGGGCC
TGCTGCAACCGATCAAAATCACACCCACCGACCACGAAGGTGGTGGTGCTGCCCGCATCCAGAGCTGGGATGGCAAGAAA
TGGGTGCTGAAGACCGATTGGATCAAGGCAGATCACGATCTTCTCAATCCGCTGATCAAGCAAGGGGCGGAAGCTTACGC
CAAGGAACACGGCATCACGCCTCGCACACCGGAAACAGAAACCAATTGA

Upstream 100 bases:

>100_bases
TGATCAAGGAACCTGAGGGTCTGTCGCGCCTGCTCGGTTTGCGGCGTGCGCATGGCGCACGTCGGCGTCTCTTTCCCTCC
TAACCACAAGAGTGAACCCT

Downstream 100 bases:

>100_bases
TCCATTGAGATCGGGCGCGCGCGGTATCGCCGCGCCCATTTTGGGAACACAGGGGATATCGGATGTTCAAGATATTTTTG
CGAAATGCCCTTGCTGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MKRFVIAALFASTIFSASAPAFAADVSQYIPLPTYRVGAYASSGELWWAGERDYFRYINEVEGGVEGVKLNYEEFETEWS
PDRTVEVYERVKAGKDGSPLAFFFTHGTPATYALLEKAAADKIPLIDPAGGKTETVDGTVFPYAFPLLFSYYSQASTGIN
YIASKVGGLDKLKGLKIATLYHDSAYGRASQPAIELLAKKYGFENIQIPVADPGNEQSPQWRQIREQKPDWVFLRTWGVS
TVVALKTAQRFGFPADHIIGDVWAGSESDAIPAGAAAIGYSALAPYPGGTDFEIHKRLKAEILDKGKSDLRDPKLFGAVN
YNIGLVNAALAVEALRTGYKHFGPKPLNGEQGRWAFEHLTIDDKRLEQIGFKGLLQPIKITPTDHEGGGAARIQSWDGKK
WVLKTDWIKADHDLLNPLIKQGAEAYAKEHGITPRTPETETN

Sequences:

>Translated_442_residues
MKRFVIAALFASTIFSASAPAFAADVSQYIPLPTYRVGAYASSGELWWAGERDYFRYINEVEGGVEGVKLNYEEFETEWS
PDRTVEVYERVKAGKDGSPLAFFFTHGTPATYALLEKAAADKIPLIDPAGGKTETVDGTVFPYAFPLLFSYYSQASTGIN
YIASKVGGLDKLKGLKIATLYHDSAYGRASQPAIELLAKKYGFENIQIPVADPGNEQSPQWRQIREQKPDWVFLRTWGVS
TVVALKTAQRFGFPADHIIGDVWAGSESDAIPAGAAAIGYSALAPYPGGTDFEIHKRLKAEILDKGKSDLRDPKLFGAVN
YNIGLVNAALAVEALRTGYKHFGPKPLNGEQGRWAFEHLTIDDKRLEQIGFKGLLQPIKITPTDHEGGGAARIQSWDGKK
WVLKTDWIKADHDLLNPLIKQGAEAYAKEHGITPRTPETETN
>Mature_442_residues
MKRFVIAALFASTIFSASAPAFAADVSQYIPLPTYRVGAYASSGELWWAGERDYFRYINEVEGGVEGVKLNYEEFETEWS
PDRTVEVYERVKAGKDGSPLAFFFTHGTPATYALLEKAAADKIPLIDPAGGKTETVDGTVFPYAFPLLFSYYSQASTGIN
YIASKVGGLDKLKGLKIATLYHDSAYGRASQPAIELLAKKYGFENIQIPVADPGNEQSPQWRQIREQKPDWVFLRTWGVS
TVVALKTAQRFGFPADHIIGDVWAGSESDAIPAGAAAIGYSALAPYPGGTDFEIHKRLKAEILDKGKSDLRDPKLFGAVN
YNIGLVNAALAVEALRTGYKHFGPKPLNGEQGRWAFEHLTIDDKRLEQIGFKGLLQPIKITPTDHEGGGAARIQSWDGKK
WVLKTDWIKADHDLLNPLIKQGAEAYAKEHGITPRTPETETN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48622; Mature: 48622

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFVIAALFASTIFSASAPAFAADVSQYIPLPTYRVGAYASSGELWWAGERDYFRYINE
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCEECCCCEEECCCHHHHHHHHH
VEGGVEGVKLNYEEFETEWSPDRTVEVYERVKAGKDGSPLAFFFTHGTPATYALLEKAAA
HCCCCCEEEECHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHC
DKIPLIDPAGGKTETVDGTVFPYAFPLLFSYYSQASTGINYIASKVGGLDKLKGLKIATL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHCCCEEEEE
YHDSAYGRASQPAIELLAKKYGFENIQIPVADPGNEQSPQWRQIREQKPDWVFLRTWGVS
EECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCH
TVVALKTAQRFGFPADHIIGDVWAGSESDAIPAGAAAIGYSALAPYPGGTDFEIHKRLKA
HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCHHHCCCCCCCCCHHHHHHHHH
EILDKGKSDLRDPKLFGAVNYNIGLVNAALAVEALRTGYKHFGPKPLNGEQGRWAFEHLT
HHHHCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
IDDKRLEQIGFKGLLQPIKITPTDHEGGGAARIQSWDGKKWVLKTDWIKADHDLLNPLIK
CCHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHH
QGAEAYAKEHGITPRTPETETN
HHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKRFVIAALFASTIFSASAPAFAADVSQYIPLPTYRVGAYASSGELWWAGERDYFRYINE
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCEECCCCEEECCCHHHHHHHHH
VEGGVEGVKLNYEEFETEWSPDRTVEVYERVKAGKDGSPLAFFFTHGTPATYALLEKAAA
HCCCCCEEEECHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHC
DKIPLIDPAGGKTETVDGTVFPYAFPLLFSYYSQASTGINYIASKVGGLDKLKGLKIATL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHCCCEEEEE
YHDSAYGRASQPAIELLAKKYGFENIQIPVADPGNEQSPQWRQIREQKPDWVFLRTWGVS
EECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCH
TVVALKTAQRFGFPADHIIGDVWAGSESDAIPAGAAAIGYSALAPYPGGTDFEIHKRLKA
HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCHHHCCCCCCCCCHHHHHHHHH
EILDKGKSDLRDPKLFGAVNYNIGLVNAALAVEALRTGYKHFGPKPLNGEQGRWAFEHLT
HHHHCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
IDDKRLEQIGFKGLLQPIKITPTDHEGGGAARIQSWDGKKWVLKTDWIKADHDLLNPLIK
CCHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHH
QGAEAYAKEHGITPRTPETETN
HHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA