Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102532

Identifier: 222102532

GI number: 222102532

Start: 127916

End: 129265

Strand: Direct

Name: 222102532

Synonym: Avi_7160

Alternate gene names: NA

Gene position: 127916-129265 (Clockwise)

Preceding gene: 222102531

Following gene: 222102533

Centisome position: 20.25

GC content: 56.52

Gene sequence:

>1350_bases
ATGTTCAAGATATTTTTGCGAAATGCCCTTGCTGTCGCAGCATCGGCTTTTGTCTTCGCAAGCGCTGCACAGGCCATTGA
GACGACGCCGGGACCAGATAGCAACAAGCAGTTTTTCCCAATCGCCAGTTTTCGCGTCGGTCCTTATGCGGCCTCCGGTG
CATCCATCTGGGCGGGACGTATCGATTACTATCGCTATATCAACGAGGTGGAAGGCGGCATCAATGGTGTTCCCATCGTC
TGGCAGGAATGCGAAACGGAGTGGACCGCCGAAAAGGGTATTGAGTGCTATGAACGTTTCAAGCGCGGCCTGAATGGCGC
GCCGATTTCCGCCTATTTCCCCAATGGTGCTCCGGCAGCCTATGCTCTGTCTGATCGCGCCACCAAAGACAAGATTCCGC
TGGTAACTCTGGCCTATGGCCGCACAGAAGCCACCGATGGCCGCGTCTTTCCTTACAATTTCCCCGTGATGGTGACCTTC
TACAGCGAAGCCTCAGCGGTGGTGAATTATATTGCCCAGCGTGAGGGCGGGTTTGACAAGCTCAAGGGCAAGAAGATCGC
CACTGTCTATCATGACAGCGCCTATGGCCGCGAAACCCTTGATCCGCTGGCGCTGCTGGCCAAGAAATATGGTTTTGAAA
ACATCCAGATTCCGGTTGCCGATCCCGGCAGCGAGCAATCATCACAATGGCGGCAGGTGCGCGAGCAGAAGCCGGATTGG
GTTTTTCTGCGCACATGGGGCGTGTCCACGCCCGTTGCCATCAAGACCGCCCAGCGCTTCGGTTTCCCCGCTGATCATGT
GATTGGCGATGTTTGGGCTTCGTCCGAAGAGGATGTGATTCCGGCAGGGGATGCCGCCAAGGGGTATCTCGCTCTGACAC
CATACCCAGCAGGTGCGGATTTCGACATCCATAAGCGTCTGAAGCAATCTATCATCGACACGGGCAAATCGGACCTGCGC
GACACCAAGGCTTTTGGCAGCGTCTATTACAATTCCGGTCTGGTGGATGCGCTGATTTCGGTCGAAATCGTGCGACAGGC
GCAGGCCAAATTCGGCAACCGCCCGATCACCAGCGAAGAGGCACAGTGGGCTCTGGAACATTTCAAGCTCGATGATGCCG
CGCTGAAAAAGGCAGGCTTCCTTGGCCTTGTGCAAAACCTGCAACTGACACCCGCCGATCACGAGGGTGGCGGTGCCGTG
CGCGTGCAGCAATGGAATGGTAAAAACTGGACGCTGATCAGTGACTGGGTGCAGGCGGATCGCCAAACCCTTCGCCCGCT
GATTGACGCGAAATCCGCAGCCTATGCCAAGGAAAACGGCATTACCCCGCGGGATGTTGGCACCAACTGA

Upstream 100 bases:

>100_bases
GCATCACGCCTCGCACACCGGAAACAGAAACCAATTGATCCATTGAGATCGGGCGCGCGCGGTATCGCCGCGCCCATTTT
GGGAACACAGGGGATATCGG

Downstream 100 bases:

>100_bases
TGGGTCATGCACCGGAGCGGCCCCCGCTGCTCCGGTTTTTGGCGTTTGTCAGGGAAAAGTGGAACCCGGTTTTCCCGAAA
AGACAAACGAAAACAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MFKIFLRNALAVAASAFVFASAAQAIETTPGPDSNKQFFPIASFRVGPYAASGASIWAGRIDYYRYINEVEGGINGVPIV
WQECETEWTAEKGIECYERFKRGLNGAPISAYFPNGAPAAYALSDRATKDKIPLVTLAYGRTEATDGRVFPYNFPVMVTF
YSEASAVVNYIAQREGGFDKLKGKKIATVYHDSAYGRETLDPLALLAKKYGFENIQIPVADPGSEQSSQWRQVREQKPDW
VFLRTWGVSTPVAIKTAQRFGFPADHVIGDVWASSEEDVIPAGDAAKGYLALTPYPAGADFDIHKRLKQSIIDTGKSDLR
DTKAFGSVYYNSGLVDALISVEIVRQAQAKFGNRPITSEEAQWALEHFKLDDAALKKAGFLGLVQNLQLTPADHEGGGAV
RVQQWNGKNWTLISDWVQADRQTLRPLIDAKSAAYAKENGITPRDVGTN

Sequences:

>Translated_449_residues
MFKIFLRNALAVAASAFVFASAAQAIETTPGPDSNKQFFPIASFRVGPYAASGASIWAGRIDYYRYINEVEGGINGVPIV
WQECETEWTAEKGIECYERFKRGLNGAPISAYFPNGAPAAYALSDRATKDKIPLVTLAYGRTEATDGRVFPYNFPVMVTF
YSEASAVVNYIAQREGGFDKLKGKKIATVYHDSAYGRETLDPLALLAKKYGFENIQIPVADPGSEQSSQWRQVREQKPDW
VFLRTWGVSTPVAIKTAQRFGFPADHVIGDVWASSEEDVIPAGDAAKGYLALTPYPAGADFDIHKRLKQSIIDTGKSDLR
DTKAFGSVYYNSGLVDALISVEIVRQAQAKFGNRPITSEEAQWALEHFKLDDAALKKAGFLGLVQNLQLTPADHEGGGAV
RVQQWNGKNWTLISDWVQADRQTLRPLIDAKSAAYAKENGITPRDVGTN
>Mature_449_residues
MFKIFLRNALAVAASAFVFASAAQAIETTPGPDSNKQFFPIASFRVGPYAASGASIWAGRIDYYRYINEVEGGINGVPIV
WQECETEWTAEKGIECYERFKRGLNGAPISAYFPNGAPAAYALSDRATKDKIPLVTLAYGRTEATDGRVFPYNFPVMVTF
YSEASAVVNYIAQREGGFDKLKGKKIATVYHDSAYGRETLDPLALLAKKYGFENIQIPVADPGSEQSSQWRQVREQKPDW
VFLRTWGVSTPVAIKTAQRFGFPADHVIGDVWASSEEDVIPAGDAAKGYLALTPYPAGADFDIHKRLKQSIIDTGKSDLR
DTKAFGSVYYNSGLVDALISVEIVRQAQAKFGNRPITSEEAQWALEHFKLDDAALKKAGFLGLVQNLQLTPADHEGGGAV
RVQQWNGKNWTLISDWVQADRQTLRPLIDAKSAAYAKENGITPRDVGTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49343; Mature: 49343

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKIFLRNALAVAASAFVFASAAQAIETTPGPDSNKQFFPIASFRVGPYAASGASIWAGR
CEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECEECCCCCCCCCHHHHHH
IDYYRYINEVEGGINGVPIVWQECETEWTAEKGIECYERFKRGLNGAPISAYFPNGAPAA
HHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHCHHHHHHHHCCCCCCCEEEECCCCCCCE
YALSDRATKDKIPLVTLAYGRTEATDGRVFPYNFPVMVTFYSEASAVVNYIAQREGGFDK
EEECCCCCCCCCCEEEEECCCCCCCCCEEEEECCCEEEEEECHHHHHHHHHHHCCCCHHH
LKGKKIATVYHDSAYGRETLDPLALLAKKYGFENIQIPVADPGSEQSSQWRQVREQKPDW
HCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCE
VFLRTWGVSTPVAIKTAQRFGFPADHVIGDVWASSEEDVIPAGDAAKGYLALTPYPAGAD
EEEEECCCCCCCEEHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCC
FDIHKRLKQSIIDTGKSDLRDTKAFGSVYYNSGLVDALISVEIVRQAQAKFGNRPITSEE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
AQWALEHFKLDDAALKKAGFLGLVQNLQLTPADHEGGGAVRVQQWNGKNWTLISDWVQAD
HHHHHHHHCCCHHHHHHHHHHHHHHCCEECCCCCCCCCEEEEEEECCCCCEEEHHHHHHH
RQTLRPLIDAKSAAYAKENGITPRDVGTN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFKIFLRNALAVAASAFVFASAAQAIETTPGPDSNKQFFPIASFRVGPYAASGASIWAGR
CEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECEECCCCCCCCCHHHHHH
IDYYRYINEVEGGINGVPIVWQECETEWTAEKGIECYERFKRGLNGAPISAYFPNGAPAA
HHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHCHHHHHHHHCCCCCCCEEEECCCCCCCE
YALSDRATKDKIPLVTLAYGRTEATDGRVFPYNFPVMVTFYSEASAVVNYIAQREGGFDK
EEECCCCCCCCCCEEEEECCCCCCCCCEEEEECCCEEEEEECHHHHHHHHHHHCCCCHHH
LKGKKIATVYHDSAYGRETLDPLALLAKKYGFENIQIPVADPGSEQSSQWRQVREQKPDW
HCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCE
VFLRTWGVSTPVAIKTAQRFGFPADHVIGDVWASSEEDVIPAGDAAKGYLALTPYPAGAD
EEEEECCCCCCCEEHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCC
FDIHKRLKQSIIDTGKSDLRDTKAFGSVYYNSGLVDALISVEIVRQAQAKFGNRPITSEE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
AQWALEHFKLDDAALKKAGFLGLVQNLQLTPADHEGGGAVRVQQWNGKNWTLISDWVQAD
HHHHHHHHCCCHHHHHHHHHHHHHHCCEECCCCCCCCCEEEEEEECCCCCEEEHHHHHHH
RQTLRPLIDAKSAAYAKENGITPRDVGTN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA