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The map label for this gene is rutA

Identifier: 222102506

GI number: 222102506

Start: 100680

End: 101783

Strand: Direct

Name: rutA

Synonym: Avi_7126

Alternate gene names: 222102506

Gene position: 100680-101783 (Clockwise)

Preceding gene: 222102498

Following gene: 222102508

Centisome position: 15.94

GC content: 56.88

Gene sequence:

>1104_bases
ATGACGAAGATCGGAGTCTTCATTCCCATCGGCAGCCGCGGCTGGCTTATTTCCACCACTTCGCCCGCAACCATGCCGAG
TTTTGAGCTCAACAAGGCGGTGGTGCAGCAGGCAGAACATTACGGCCTCGATTTTGCCCTGTCGATGATCAAGCTTCGTG
GCTATAATGGCCCGAGTGAATATTGGGTCCATAATCTGGAATCCTTCACCCTGATGGCCGGCTTGGCCGCCGTTACCAAG
AAAATTCAGCTGTTTGCATCTGTGGCCATGTTGACCATGCCGCCCGCAGTGGTGGCACGCATGGCGGCGACGATCGATTC
GATTGCGCCGGGCCGCTTTGGCATCAATATGGTCACCGGCTGGCAGCCTAAAGAATACCAGCAGATGGGCCTTGAGCTGA
CACCCGAGCATTTTGCCCGCCGCTATGACTATGCCTCGGAATATGTGCAGGTGATGCGCGATTTGTGGACCAAGGGCGTC
TCCAACTTCAAGGGCGAGTTCTTCCAGATGGACGACTGCAAGCTGTCGCCACGTCCATCCGCCCATATTCCAGTGGTTGG
TGCGGGCCAGTCGGAACGCGGCATGCGGTTTGTGGCGGAATATGGCGACTACAACTTCATTGGCGCTGGCGGGGATATGA
ACCAGACCGATGGTGCCCGCACCATGGTGGCCAAGGTGGAAGCCGCGGCAAAGCAAAGCGGACGCGACACCGGCGCCTTT
CTGCTTTTGATGGTGATTGCCGACCGTACTGACGAGTTAGCCTTTGCAAAGTGGGAGCTTTACAAGCAGGGTACCGACAT
CGAAGCGCTGGAATGGCAGGCCAGTCAGGCCGGGCAGGATACGGTGGCCAAGGAAGGCTCAACGGCCGCCGCCCTGGTGC
GCCAGATCAAAAATCCGCAGCCAACCGGCATGCTGAAGCTGATCGGCTCCTATGAAAAAGTCGCGGCAATGCTGGATGAA
ATTGCTTTGAGCACTCCAGGCCTGAAAGGCATCATGCTGACCTTTGATGACTTCGTCATCGGCATGGAGCAGTTTGGCCA
ATATATCCAGCCCTTGATGCGTTCCCGCAATCCCAACCTCAAACGCAATCTGGATGCAGCGTGA

Upstream 100 bases:

>100_bases
CATGAGTTTTTCTCAAGGTGCAGCTTCGAATTCGTCGCTTGGCATTGCACGCAAGCCGTTCAACTCTTGCTTCATAACAA
CAGAAGAGAGGAACGCGCTT

Downstream 100 bases:

>100_bases
GGTGAACAGATGCTTAGGTTCTGTCAGGTTCAGGTTGAACCAGACAGAACCTAGTTTTGTGTTTTCGTGTGTCTTTTAGG
GAAAACCGGTTTCCACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTKIGVFIPIGSRGWLISTTSPATMPSFELNKAVVQQAEHYGLDFALSMIKLRGYNGPSEYWVHNLESFTLMAGLAAVTK
KIQLFASVAMLTMPPAVVARMAATIDSIAPGRFGINMVTGWQPKEYQQMGLELTPEHFARRYDYASEYVQVMRDLWTKGV
SNFKGEFFQMDDCKLSPRPSAHIPVVGAGQSERGMRFVAEYGDYNFIGAGGDMNQTDGARTMVAKVEAAAKQSGRDTGAF
LLLMVIADRTDELAFAKWELYKQGTDIEALEWQASQAGQDTVAKEGSTAAALVRQIKNPQPTGMLKLIGSYEKVAAMLDE
IALSTPGLKGIMLTFDDFVIGMEQFGQYIQPLMRSRNPNLKRNLDAA

Sequences:

>Translated_367_residues
MTKIGVFIPIGSRGWLISTTSPATMPSFELNKAVVQQAEHYGLDFALSMIKLRGYNGPSEYWVHNLESFTLMAGLAAVTK
KIQLFASVAMLTMPPAVVARMAATIDSIAPGRFGINMVTGWQPKEYQQMGLELTPEHFARRYDYASEYVQVMRDLWTKGV
SNFKGEFFQMDDCKLSPRPSAHIPVVGAGQSERGMRFVAEYGDYNFIGAGGDMNQTDGARTMVAKVEAAAKQSGRDTGAF
LLLMVIADRTDELAFAKWELYKQGTDIEALEWQASQAGQDTVAKEGSTAAALVRQIKNPQPTGMLKLIGSYEKVAAMLDE
IALSTPGLKGIMLTFDDFVIGMEQFGQYIQPLMRSRNPNLKRNLDAA
>Mature_366_residues
TKIGVFIPIGSRGWLISTTSPATMPSFELNKAVVQQAEHYGLDFALSMIKLRGYNGPSEYWVHNLESFTLMAGLAAVTKK
IQLFASVAMLTMPPAVVARMAATIDSIAPGRFGINMVTGWQPKEYQQMGLELTPEHFARRYDYASEYVQVMRDLWTKGVS
NFKGEFFQMDDCKLSPRPSAHIPVVGAGQSERGMRFVAEYGDYNFIGAGGDMNQTDGARTMVAKVEAAAKQSGRDTGAFL
LLMVIADRTDELAFAKWELYKQGTDIEALEWQASQAGQDTVAKEGSTAAALVRQIKNPQPTGMLKLIGSYEKVAAMLDEI
ALSTPGLKGIMLTFDDFVIGMEQFGQYIQPLMRSRNPNLKRNLDAA

Specific function: Catalyzes the pyrimidine ring opening between N-3 and C- 4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product wh

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family. RutA subfamily

Homologues:

Organism=Escherichia coli, GI1787247, Length=359, Percent_Identity=58.2172701949861, Blast_Score=427, Evalue=1e-121,
Organism=Escherichia coli, GI1787166, Length=227, Percent_Identity=26.431718061674, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUTA_AGRVS (B9K4P2)

Other databases:

- EMBL:   CP000638
- RefSeq:   YP_002539545.1
- ProteinModelPortal:   B9K4P2
- GeneID:   7380170
- GenomeReviews:   CP000638_GR
- KEGG:   avi:Avi_7126
- ProtClustDB:   CLSK879925
- HAMAP:   MF_01699
- InterPro:   IPR011251
- InterPro:   IPR019914
- InterPro:   IPR016048
- Gene3D:   G3DSA:3.20.20.30
- TIGRFAMs:   TIGR03612

Pfam domain/function: PF00296 Bac_luciferase; SSF51679 Luciferase_like

EC number: NA

Molecular weight: Translated: 40415; Mature: 40284

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: BINDING 116-116 BINDING 125-125 BINDING 191-191

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIGVFIPIGSRGWLISTTSPATMPSFELNKAVVQQAEHYGLDFALSMIKLRGYNGPSE
CCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHH
YWVHNLESFTLMAGLAAVTKKIQLFASVAMLTMPPAVVARMAATIDSIAPGRFGINMVTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECC
WQPKEYQQMGLELTPEHFARRYDYASEYVQVMRDLWTKGVSNFKGEFFQMDDCKLSPRPS
CCCHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
AHIPVVGAGQSERGMRFVAEYGDYNFIGAGGDMNQTDGARTMVAKVEAAAKQSGRDTGAF
CCCEEEECCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
LLLMVIADRTDELAFAKWELYKQGTDIEALEWQASQAGQDTVAKEGSTAAALVRQIKNPQ
HHHHHHHCCCCCHHHHHHHHHHCCCCCCHHCCCCHHCCCHHHHCCCCHHHHHHHHHCCCC
PTGMLKLIGSYEKVAAMLDEIALSTPGLKGIMLTFDDFVIGMEQFGQYIQPLMRSRNPNL
CCCHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC
KRNLDAA
CCCCCCC
>Mature Secondary Structure 
TKIGVFIPIGSRGWLISTTSPATMPSFELNKAVVQQAEHYGLDFALSMIKLRGYNGPSE
CCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHH
YWVHNLESFTLMAGLAAVTKKIQLFASVAMLTMPPAVVARMAATIDSIAPGRFGINMVTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECC
WQPKEYQQMGLELTPEHFARRYDYASEYVQVMRDLWTKGVSNFKGEFFQMDDCKLSPRPS
CCCHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
AHIPVVGAGQSERGMRFVAEYGDYNFIGAGGDMNQTDGARTMVAKVEAAAKQSGRDTGAF
CCCEEEECCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
LLLMVIADRTDELAFAKWELYKQGTDIEALEWQASQAGQDTVAKEGSTAAALVRQIKNPQ
HHHHHHHCCCCCHHHHHHHHHHCCCCCCHHCCCCHHCCCHHHHCCCCHHHHHHHHHCCCC
PTGMLKLIGSYEKVAAMLDEIALSTPGLKGIMLTFDDFVIGMEQFGQYIQPLMRSRNPNL
CCCHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC
KRNLDAA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA