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The map label for this gene is rutF [H]

Identifier: 222102508

GI number: 222102508

Start: 103570

End: 104073

Strand: Direct

Name: rutF [H]

Synonym: Avi_7128

Alternate gene names: 222102508

Gene position: 103570-104073 (Clockwise)

Preceding gene: 222102506

Following gene: 222102509

Centisome position: 16.39

GC content: 57.94

Gene sequence:

>504_bases
ATGGATATTGCCCGGTTCAAGCTTGGCATGCGCCGTCTGGCTTCTGGCGTGTCACTGATCACCACGCTCTCTGACGGTGT
GCGCCACGGATTGGTGGCAACGGCGGTCAGTTCCGTCAGCGGTGATCCACCGTCGCTGCTGATCTGCGTCAACAAAAATG
CCTCAGCGCATGGGCATATCGAGCGCTCCGGAATCTACTGTGTCAACATCCTGTCGGAAAGCGCCCAGCCGATTGCCGCC
AGCTTTTCCAGCGCCATTGACCGGGACAAGCGGTTTTTGCGTGGTGAATGGCAGATACTAAAGACCGGCGCACCCGCCCT
TGTCGATTCACTGGCCAGCTTTGATTGCGAGGTGCGCCACGCACTCTCCTACGCCACACATACGATCTTCATCGCTGACA
TCGTCGCAACAGAGCTTTGGGACAGTACCGATGCACCATTGGTCTATCTGGATGGCCGCTATCGGCAGGTGCTTGTCGAG
CCGGATATGACACCCGCTGAGTGA

Upstream 100 bases:

>100_bases
CACTCTCGGGCAACATAGTTTCCACCGAAGGCTGATGCGCATTTTTAACGTGTGTTTTGGCAAGAACCATCAAAACAGCA
TGAAACGGAGATGGAAAACC

Downstream 100 bases:

>100_bases
GATTTTCATGAGGCGCGAGGCACCAAGTATAGTTCGTACTGATCATAAAAACGGGAACAGAAGCACGGCAAAAGCCGGCA
TATGGAGCATCAGATGAGCA

Product: flavoprotein oxidoreductase

Products: NA

Alternate protein names: FMN reductase; NAD(P)H:flavin oxidoreductase [H]

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MDIARFKLGMRRLASGVSLITTLSDGVRHGLVATAVSSVSGDPPSLLICVNKNASAHGHIERSGIYCVNILSESAQPIAA
SFSSAIDRDKRFLRGEWQILKTGAPALVDSLASFDCEVRHALSYATHTIFIADIVATELWDSTDAPLVYLDGRYRQVLVE
PDMTPAE

Sequences:

>Translated_167_residues
MDIARFKLGMRRLASGVSLITTLSDGVRHGLVATAVSSVSGDPPSLLICVNKNASAHGHIERSGIYCVNILSESAQPIAA
SFSSAIDRDKRFLRGEWQILKTGAPALVDSLASFDCEVRHALSYATHTIFIADIVATELWDSTDAPLVYLDGRYRQVLVE
PDMTPAE
>Mature_167_residues
MDIARFKLGMRRLASGVSLITTLSDGVRHGLVATAVSSVSGDPPSLLICVNKNASAHGHIERSGIYCVNILSESAQPIAA
SFSSAIDRDKRFLRGEWQILKTGAPALVDSLASFDCEVRHALSYATHTIFIADIVATELWDSTDAPLVYLDGRYRQVLVE
PDMTPAE

Specific function: Catalyzes the reduction of FMN to FMNH2 which is used to reduce pyrimidine by RutA via the Rut pathway [H]

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the non-flavoprotein flavin reductase family. RutF subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081819, Length=158, Percent_Identity=33.5443037974684, Blast_Score=97, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019917
- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: =1.5.1.29 [H]

Molecular weight: Translated: 18059; Mature: 18059

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIARFKLGMRRLASGVSLITTLSDGVRHGLVATAVSSVSGDPPSLLICVNKNASAHGHI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCE
ERSGIYCVNILSESAQPIAASFSSAIDRDKRFLRGEWQILKTGAPALVDSLASFDCEVRH
ECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCHHHHH
ALSYATHTIFIADIVATELWDSTDAPLVYLDGRYRQVLVEPDMTPAE
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCC
>Mature Secondary Structure
MDIARFKLGMRRLASGVSLITTLSDGVRHGLVATAVSSVSGDPPSLLICVNKNASAHGHI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCE
ERSGIYCVNILSESAQPIAASFSSAIDRDKRFLRGEWQILKTGAPALVDSLASFDCEVRH
ECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCHHHHH
ALSYATHTIFIADIVATELWDSTDAPLVYLDGRYRQVLVEPDMTPAE
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA