Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102490

Identifier: 222102490

GI number: 222102490

Start: 86119

End: 86688

Strand: Reverse

Name: 222102490

Synonym: Avi_7100

Alternate gene names: NA

Gene position: 86688-86119 (Counterclockwise)

Preceding gene: 222102491

Following gene: 222102489

Centisome position: 13.72

GC content: 47.37

Gene sequence:

>570_bases
ATGTTTGATCGCTACACACTTGATTCAAAAGAATATCATCAAATTGATACTCTGGTTTCATCTATCAAGCATAGAGCTCT
ACGCGCGTGGCTTTCTGAACTCGCTGGCGATGATGGATATTGGGTAAATGATAGTTGCGGCATGCCTTGTTGGGTTGCGC
CGATGCACCAGCATGCGCGGCTTTGGAATGCTCTTTCCAATTCAAATGCTAGTGCGATGGAAGCGATCAAGGAGTTGTGG
ACGGCAAATCCCATTTTGATTGGTGGAAGTAACCGCGTTGATACGACAATCCTTCAATTTGGCAAAGGGCGGCTGTTTGC
TAAAGAAGGTGCTGATGGGCTGCTTTTCCTTCATGCCACGGGCAAAAAAGGCGAACCACCGGTCACAATCCTCGTGAAGA
TGTCGCAAGCAGCTCGCGACGAGCACCTTTACTTCGCCGTCATCATAGCCATCAAGCAATACGTTCCTTCCAGGGCCACT
TTGATGCACGATTTTGCGAGTCACCTGCAATTCATCATTGCATCAAACGTTCTCTCTTTTGAATCCACTTTAGAACCTCG
GAAAAGCTAA

Upstream 100 bases:

>100_bases
TCATTTCGGGGTCCCGCACTGTCCTAGGCTTTGTACAGCCGCACGATCATGGACCAAACCGTAAAATCTCCGGCGTCAAG
TAAACAGGCTCGAAACATAT

Downstream 100 bases:

>100_bases
CTCTATGACAAACCTTTGGATATACGTAGGTGCGTGCCTCGCCATCATCGCCATTCCAGGACCAGCGCTTATCTACATTC
TGTCCCGAACCGTCGAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MFDRYTLDSKEYHQIDTLVSSIKHRALRAWLSELAGDDGYWVNDSCGMPCWVAPMHQHARLWNALSNSNASAMEAIKELW
TANPILIGGSNRVDTTILQFGKGRLFAKEGADGLLFLHATGKKGEPPVTILVKMSQAARDEHLYFAVIIAIKQYVPSRAT
LMHDFASHLQFIIASNVLSFESTLEPRKS

Sequences:

>Translated_189_residues
MFDRYTLDSKEYHQIDTLVSSIKHRALRAWLSELAGDDGYWVNDSCGMPCWVAPMHQHARLWNALSNSNASAMEAIKELW
TANPILIGGSNRVDTTILQFGKGRLFAKEGADGLLFLHATGKKGEPPVTILVKMSQAARDEHLYFAVIIAIKQYVPSRAT
LMHDFASHLQFIIASNVLSFESTLEPRKS
>Mature_189_residues
MFDRYTLDSKEYHQIDTLVSSIKHRALRAWLSELAGDDGYWVNDSCGMPCWVAPMHQHARLWNALSNSNASAMEAIKELW
TANPILIGGSNRVDTTILQFGKGRLFAKEGADGLLFLHATGKKGEPPVTILVKMSQAARDEHLYFAVIIAIKQYVPSRAT
LMHDFASHLQFIIASNVLSFESTLEPRKS

Specific function: Unknown

COG id: COG4448

COG function: function code E; L-asparaginase II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21146; Mature: 21146

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRYTLDSKEYHQIDTLVSSIKHRALRAWLSELAGDDGYWVNDSCGMPCWVAPMHQHAR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECHHHHHHH
LWNALSNSNASAMEAIKELWTANPILIGGSNRVDTTILQFGKGRLFAKEGADGLLFLHAT
HHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCEEEEECCCCEEEEEEEC
GKKGEPPVTILVKMSQAARDEHLYFAVIIAIKQYVPSRATLMHDFASHLQFIIASNVLSF
CCCCCCCEEEEEEECHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ESTLEPRKS
HHCCCCCCC
>Mature Secondary Structure
MFDRYTLDSKEYHQIDTLVSSIKHRALRAWLSELAGDDGYWVNDSCGMPCWVAPMHQHAR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECHHHHHHH
LWNALSNSNASAMEAIKELWTANPILIGGSNRVDTTILQFGKGRLFAKEGADGLLFLHAT
HHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCEEEEECCCCEEEEEEEC
GKKGEPPVTILVKMSQAARDEHLYFAVIIAIKQYVPSRATLMHDFASHLQFIIASNVLSF
CCCCCCCEEEEEEECHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ESTLEPRKS
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA