Click here to switch to the map view.

The map label for this gene is 222102491

Identifier: 222102491

GI number: 222102491

Start: 87943

End: 88314

Strand: Reverse

Name: 222102491

Synonym: Avi_7103

Alternate gene names: NA

Gene position: 88314-87943 (Counterclockwise)

Preceding gene: 222102492

Following gene: 222102490

Centisome position: 13.98

GC content: 60.48

Gene sequence:

>372_bases
CTGGAGGAAAAGCACGGTGCCAAATTCCGCAGGGGTTGGCGCAAACTGCACCTGGCGCTGGATGCCAACACTGGCGACAT
CATCGCACACGTCATGAACAATCAAGAGGTCGGCGACGGTTCGCAGGTGGGGCCGCTACTCGAGCAGATCGATATGCCGA
TCTGGCAGTTCACGGCTGATGGAGCCTATGACGGTGAGACGAACTACGACACCGTCCCAAGCCACAGCGCCGATGCTGCT
GTGGTTATCCCGCTGCCCGCCAATGCGGTGGAACGCCAGCACGACGATCCCCCCAGTCAACGAGACCGTCCGCAATCGCA
TGCTGGCCTGCGCGCACTCGAAATCCGTCGGTGTAGAAAAGCTACCGCATAG

Upstream 100 bases:

>100_bases
GCGCGCCGGATAAGAAGTACGATGATCGCATCCCTCAAAAGAGCCTGTCCGCCTCGTGATCGATAGCACAGGTTTGTAGG
TCTACGGCGCGGGGCAGTGG

Downstream 100 bases:

>100_bases
CCGCATCATCGAAGACCGAAATCCAGTCACACTACGACCGATGCACCAGCGCCCGTGGCAACTCTTGCTTGTATTCTGAT
TTTGAGCAAAATCTATTCAA

Product: Transposase and inactivated derivatives IS5 family

Products: NA

Alternate protein names: Insertion Sequence Transposase Protein; Transposase; ISSpo9 Transposase; Transposase Pseudogene; Transposase And Inactivated Derivatives IS5 Family; IS4 Family Transposase; Transposase-Like Protein; Transposase IS5 Family

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MEEKHGAKFRRGWRKLHLALDANTGDIIAHVMNNQEVGDGSQVGPLLEQIDMPIWQFTADGAYDGETNYDTVPSHSADAA
VVIPLPANAVERQHDDPPSQRDRPQSHAGLRALEIRRCRKATA

Sequences:

>Translated_123_residues
MEEKHGAKFRRGWRKLHLALDANTGDIIAHVMNNQEVGDGSQVGPLLEQIDMPIWQFTADGAYDGETNYDTVPSHSADAA
VVIPLPANAVERQHDDPPSQRDRPQSHAGLRALEIRRCRKATA
>Mature_123_residues
MEEKHGAKFRRGWRKLHLALDANTGDIIAHVMNNQEVGDGSQVGPLLEQIDMPIWQFTADGAYDGETNYDTVPSHSADAA
VVIPLPANAVERQHDDPPSQRDRPQSHAGLRALEIRRCRKATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13618; Mature: 13618

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKHGAKFRRGWRKLHLALDANTGDIIAHVMNNQEVGDGSQVGPLLEQIDMPIWQFTAD
CCCCCCHHHHHHHEEEEEEEECCCCHHHHEECCCCCCCCCCHHHHHHHHHCCCEEEEECC
GAYDGETNYDTVPSHSADAAVVIPLPANAVERQHDDPPSQRDRPQSHAGLRALEIRRCRK
CCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ATA
CCC
>Mature Secondary Structure
MEEKHGAKFRRGWRKLHLALDANTGDIIAHVMNNQEVGDGSQVGPLLEQIDMPIWQFTAD
CCCCCCHHHHHHHEEEEEEEECCCCHHHHEECCCCCCCCCCHHHHHHHHHCCCEEEEECC
GAYDGETNYDTVPSHSADAAVVIPLPANAVERQHDDPPSQRDRPQSHAGLRALEIRRCRK
CCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ATA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA