| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is braE [H]
Identifier: 222102484
GI number: 222102484
Start: 81387
End: 82346
Strand: Direct
Name: braE [H]
Synonym: Avi_7091
Alternate gene names: 222102484
Gene position: 81387-82346 (Clockwise)
Preceding gene: 222102483
Following gene: 222102485
Centisome position: 12.88
GC content: 56.67
Gene sequence:
>960_bases ATGAAACTGCTTGTTCAGAGCATGGCTCTGGTTGCCGTTATCGGTTCGGTCGCTTTTTTCGCCAGCGGATATATCGATCC CGGATTGCTCTATCTGCTCTCTGAGGCCCTGCTTTTGCTGTTCATGGCGCAGATGTGGAACCTCCTTGCCGGATATGGCG GCATGGTCTCGATGGGTCATCAGGCGTTTGTCGGGCTTGGAGCCTATCTGTTTTTCGCCTTGGCCAATTTTGGCGTTTTG CCAGTGGGCGCTGCCTTGCCGGTGGCCGCCCTTGCTGTAGGGCTGATGGCCCTGCCTTTAGGCCTGCTGCTCTTTCGGCT GCGCAACGCCTATTTCTCGGTGGCGATCTGGGTTGTGGCCGAAATTCTTGTCATCCTGTTCAGCAAATTTAGTGCGCTGG GCGGAACGGGGGGCATGACACTGCGCCCCGACGGGGGCAATCTTGACCTGCCGCTTGAGCAATATGTCTTTGCCATTGCG CTGTTTAGCTGCGTGGGCTTCACGCTGGCCATGCGCTGGGTGCTGGCCAGACCGACAGGCCTTGCCATTCTGGCGGTGCG CGATAACGAGGATGCGGCACAGGCCGCTGGCGTGAATGTGCAAAAACTCCATCTGGCCCTGTTTGCCATCTCGGCGGCGG GCTGTGCCTGGGCGGGCAGCCTTTACTACGCCAATGTTCTTTATCTGACACCCACGGATGCCTTTCAGATCAACTGGGTG ATCGGAATGATGTTCATTGCCGTGGTCGGCGGAATTGGAACTCTCACAGGGCCTGTGATTGGCACGGTGATTTTCATCGG CTTGCGCGAGTTTCTCACCAGTTTCGGCTTCTCCGGCAGCATCTATTGGATTGTCATGGGGCTGATTGTGATTGTCACCC TTGTTTATGCACCGCGTGGCCTTTGGCCTGCGCTGCACTCTCTCTTCAGACGAATGAGCATTGAAAGGAAATCCGCATGA
Upstream 100 bases:
>100_bases AGGTTGTTACCGCCCGTTTCGATGGCAACGCGGGCCTGCTTTATGTCCACCTGACGTTTCTTGCAGGTCTTGGTCTGCGT GCTTTCCGGGGGAAACTCTC
Downstream 100 bases:
>100_bases ATGCGTCGAACGATCCCACAAAATGGACGGCATCGGAGGCCAGTCTTGCCCTTGCCGCTAAACAGATCGGCGCTGTGGAG CTTCTGGATGCCTATCTTGC
Product: ABC transporter nucleotide binding/ATPase protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKLLVQSMALVAVIGSVAFFASGYIDPGLLYLLSEALLLLFMAQMWNLLAGYGGMVSMGHQAFVGLGAYLFFALANFGVL PVGAALPVAALAVGLMALPLGLLLFRLRNAYFSVAIWVVAEILVILFSKFSALGGTGGMTLRPDGGNLDLPLEQYVFAIA LFSCVGFTLAMRWVLARPTGLAILAVRDNEDAAQAAGVNVQKLHLALFAISAAGCAWAGSLYYANVLYLTPTDAFQINWV IGMMFIAVVGGIGTLTGPVIGTVIFIGLREFLTSFGFSGSIYWIVMGLIVIVTLVYAPRGLWPALHSLFRRMSIERKSA
Sequences:
>Translated_319_residues MKLLVQSMALVAVIGSVAFFASGYIDPGLLYLLSEALLLLFMAQMWNLLAGYGGMVSMGHQAFVGLGAYLFFALANFGVL PVGAALPVAALAVGLMALPLGLLLFRLRNAYFSVAIWVVAEILVILFSKFSALGGTGGMTLRPDGGNLDLPLEQYVFAIA LFSCVGFTLAMRWVLARPTGLAILAVRDNEDAAQAAGVNVQKLHLALFAISAAGCAWAGSLYYANVLYLTPTDAFQINWV IGMMFIAVVGGIGTLTGPVIGTVIFIGLREFLTSFGFSGSIYWIVMGLIVIVTLVYAPRGLWPALHSLFRRMSIERKSA >Mature_319_residues MKLLVQSMALVAVIGSVAFFASGYIDPGLLYLLSEALLLLFMAQMWNLLAGYGGMVSMGHQAFVGLGAYLFFALANFGVL PVGAALPVAALAVGLMALPLGLLLFRLRNAYFSVAIWVVAEILVILFSKFSALGGTGGMTLRPDGGNLDLPLEQYVFAIA LFSCVGFTLAMRWVLARPTGLAILAVRDNEDAAQAAGVNVQKLHLALFAISAAGCAWAGSLYYANVLYLTPTDAFQINWV IGMMFIAVVGGIGTLTGPVIGTVIFIGLREFLTSFGFSGSIYWIVMGLIVIVTLVYAPRGLWPALHSLFRRMSIERKSA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=284, Percent_Identity=23.5915492957746, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 34019; Mature: 34019
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLVQSMALVAVIGSVAFFASGYIDPGLLYLLSEALLLLFMAQMWNLLAGYGGMVSMGH CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCH QAFVGLGAYLFFALANFGVLPVGAALPVAALAVGLMALPLGLLLFRLRNAYFSVAIWVVA HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EILVILFSKFSALGGTGGMTLRPDGGNLDLPLEQYVFAIALFSCVGFTLAMRWVLARPTG HHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LAILAVRDNEDAAQAAGVNVQKLHLALFAISAAGCAWAGSLYYANVLYLTPTDAFQINWV EEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEHHHH IGMMFIAVVGGIGTLTGPVIGTVIFIGLREFLTSFGFSGSIYWIVMGLIVIVTLVYAPRG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC LWPALHSLFRRMSIERKSA CCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLLVQSMALVAVIGSVAFFASGYIDPGLLYLLSEALLLLFMAQMWNLLAGYGGMVSMGH CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCH QAFVGLGAYLFFALANFGVLPVGAALPVAALAVGLMALPLGLLLFRLRNAYFSVAIWVVA HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EILVILFSKFSALGGTGGMTLRPDGGNLDLPLEQYVFAIALFSCVGFTLAMRWVLARPTG HHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LAILAVRDNEDAAQAAGVNVQKLHLALFAISAAGCAWAGSLYYANVLYLTPTDAFQINWV EEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEHHHH IGMMFIAVVGGIGTLTGPVIGTVIFIGLREFLTSFGFSGSIYWIVMGLIVIVTLVYAPRG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC LWPALHSLFRRMSIERKSA CCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]