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The map label for this gene is 222102468

Identifier: 222102468

GI number: 222102468

Start: 65523

End: 66239

Strand: Reverse

Name: 222102468

Synonym: Avi_7074

Alternate gene names: NA

Gene position: 66239-65523 (Counterclockwise)

Preceding gene: 222102469

Following gene: 222102460

Centisome position: 10.48

GC content: 56.21

Gene sequence:

>717_bases
ATGACCCAAACCGTTCGTGATCCCCTTTATCGCCGCCACCGGTTCCCAGCTGAAGTGATTGCTCATGTCGTCTGGCTTTA
TCTTCGTTTCCCGCTCAGCTTGCGGATGGTCGAAGACTTACTGGCGGCGCGCGGGATTATTGTCTCGCACCAGACAGTCC
GCCTTTGGGCCGAGAAATTCGGTCGCCGCTTTGCCAATGAAATCCGGCGGCGTTCAGCCGGAAAGCTTGGCGACAAATGG
TATCTCGATGAAGTCGTCATCTCCATAGGCGGCAAGAAGCACTGGCTGTGGCGAGCCGTCGATCAGGATGGCTTCGTTCT
CGATGTGCTGGTGCAGAGCCGCCCTAATACCAAGGCCGCCAAACGTCTGATACGAAAGCTTCTGAAAGGACAGGGTCAAG
CACCGAGAGTGATGATGATCGACAAACTCGGATCCTACGGCGCGGCCAAACGCGACATCATGCCCGGCGTCGAACACCGT
TCACACAAGGGATTGAATAACCGGGCGGAGAATTCACATCAACCGACACGACGGCGAGAGCGCATCATGAAGGGCTTCAA
ATCAGCTCGACATCTCCAGCGTTTCGTCTCCATCCATGACCCGGTCGCAAATCTCTTCCACATTCCACGCCACGATATCC
TGTCCCACCATCACCGTGAACTGAGAACCGCAGCCATGCAAATGTGGAGTGAATTCGCGCGCCTGCAGGCTGCGTGA

Upstream 100 bases:

>100_bases
TCGGGGCTGGAACAAGGTCTGTCCTCACAAACACGCTAAGGCCGAACGCAGGCATCGTAACGTTAACCCCGCGGCGATTG
GCGTGTGCGATTTTTGCGAC

Downstream 100 bases:

>100_bases
GAGGAAGCGGCGAGTGCCAGCTTTGGCCGTAGTTCTTTAACTTTACGGTGCCCTTTCGGATGCAGCCGAGCAAGCCATCA
GCGTATTCGCGGCAATCATC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTQTVRDPLYRRHRFPAEVIAHVVWLYLRFPLSLRMVEDLLAARGIIVSHQTVRLWAEKFGRRFANEIRRRSAGKLGDKW
YLDEVVISIGGKKHWLWRAVDQDGFVLDVLVQSRPNTKAAKRLIRKLLKGQGQAPRVMMIDKLGSYGAAKRDIMPGVEHR
SHKGLNNRAENSHQPTRRRERIMKGFKSARHLQRFVSIHDPVANLFHIPRHDILSHHHRELRTAAMQMWSEFARLQAA

Sequences:

>Translated_238_residues
MTQTVRDPLYRRHRFPAEVIAHVVWLYLRFPLSLRMVEDLLAARGIIVSHQTVRLWAEKFGRRFANEIRRRSAGKLGDKW
YLDEVVISIGGKKHWLWRAVDQDGFVLDVLVQSRPNTKAAKRLIRKLLKGQGQAPRVMMIDKLGSYGAAKRDIMPGVEHR
SHKGLNNRAENSHQPTRRRERIMKGFKSARHLQRFVSIHDPVANLFHIPRHDILSHHHRELRTAAMQMWSEFARLQAA
>Mature_237_residues
TQTVRDPLYRRHRFPAEVIAHVVWLYLRFPLSLRMVEDLLAARGIIVSHQTVRLWAEKFGRRFANEIRRRSAGKLGDKWY
LDEVVISIGGKKHWLWRAVDQDGFVLDVLVQSRPNTKAAKRLIRKLLKGQGQAPRVMMIDKLGSYGAAKRDIMPGVEHRS
HKGLNNRAENSHQPTRRRERIMKGFKSARHLQRFVSIHDPVANLFHIPRHDILSHHHRELRTAAMQMWSEFARLQAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 27818; Mature: 27687

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTVRDPLYRRHRFPAEVIAHVVWLYLRFPLSLRMVEDLLAARGIIVSHQTVRLWAEKF
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GRRFANEIRRRSAGKLGDKWYLDEVVISIGGKKHWLWRAVDQDGFVLDVLVQSRPNTKAA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHEEECCCCCCEEHHHHHCCCCHHHH
KRLIRKLLKGQGQAPRVMMIDKLGSYGAAKRDIMPGVEHRSHKGLNNRAENSHQPTRRRE
HHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHH
RIMKGFKSARHLQRFVSIHDPVANLFHIPRHDILSHHHRELRTAAMQMWSEFARLQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQTVRDPLYRRHRFPAEVIAHVVWLYLRFPLSLRMVEDLLAARGIIVSHQTVRLWAEKF
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GRRFANEIRRRSAGKLGDKWYLDEVVISIGGKKHWLWRAVDQDGFVLDVLVQSRPNTKAA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHEEECCCCCCEEHHHHHCCCCHHHH
KRLIRKLLKGQGQAPRVMMIDKLGSYGAAKRDIMPGVEHRSHKGLNNRAENSHQPTRRRE
HHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHH
RIMKGFKSARHLQRFVSIHDPVANLFHIPRHDILSHHHRELRTAAMQMWSEFARLQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]