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The map label for this gene is parB

Identifier: 222102437

GI number: 222102437

Start: 33780

End: 35495

Strand: Direct

Name: parB

Synonym: Avi_7035

Alternate gene names: NA

Gene position: 33780-35495 (Clockwise)

Preceding gene: 222102435

Following gene: 222102438

Centisome position: 5.35

GC content: 62.06

Gene sequence:

>1716_bases
ATGCAGTTGATTACAGCCGATCCGCGCAGTCTGAAGGACAATCCCGACCGGTCGCGCCAGTCGAAATCCTCACCACAGTC
CGACGCGCTATTGTGCGCATCGATCAGGGCTATCGGTGTCGTGCAGCCACCGATCGTCAAACTCGATCCGGAGGGCGGCA
ACAGTTACATCATCGTCTTCGGCCATCGACGTGCAGCACAAGCCATCGCCGCGGATCTCGTGGAAATCCCGCTGCTGCTG
GCAGATCCCTCCGACGATCTCGGCGCCATGCAGTCTTTTGCCGAAAACATCGCCCGCGAACCGCTGAATCCGGTCGATCA
ATGGTGCGCCATCGAGCGGCTGGTAGCTCTCGGATGGACCGAGGAGTCGATCGCCATGGCGCTGGCACTTCCGAGCCGGC
AGATCCGCAAGCTGCGGTTTCTGGCCAATATCCTGCCCGCGATGCTCGACCAGATGGCGCGCGGTGACATGCCGAACGAG
CAGCAACTGCGCACAATCGCCGCCGCCGGACAGGATGAGCAGGCCGAGGTGTGGAAGAAGTACAAGCCGAAGAAGCAGGA
CCCGCAGGTTTCGTGGTGGGAGGTTGCCCGCGCACTGACCACGACCCGGATGCTCGCCAAACATGCAAGCTTCGGCGACG
ATCTGGCACAGGCTTACGGCATCACCTGGGTCGAGGACCTGTTTGCTCCCGCCGATGAGGACAGCCGCTATACCACCGAC
GTCGAGGCGTTTCTCGGGGCGCAGCAGGAGTGGCTGGCCAACAATCTGCCCAAGCGCGGTTCGGTCATCGAGGCCAATGA
ATACGGCCAGGCCAAGCTGCCTGCCAAAGCGCAACAGGTCTACGGCAAGCCGGGCAAGGGTGACCTGACCGGATGGTACA
TCAACGCGCGAGACGGCTCGGTTCAGTCGGTTGCCTACCGCATGCCCGAGGCTAAGAAGCCCAAGCTGGTCAAGGATCTC
GATGGTGTCGAAACCATCGTCGAGGAGGTTGAGACGCCGAAAGTGCGGCCCGATGTGACCCAGAAGGGTCTCGACATGAT
CGGCGACTTGCGGACGGACGCTCTGCACGAGGCGCTCGCGCGTGCACCGATCGAGGACGACACGTTGATGGCTTTGCTCA
TTCTCGCCTTCACCGGCATGAATGTCACGGTTGCCAGCGGTGCATCGGACAATCCCTATGGTCATGCGAAATGCGGCCCG
CATGCTGCTAGGCTGATTGGCGAGGACGGCAAGCTGTCCTTCGATCGTGAGACACTGCTGCAGGCTGCGCGCTCGGTCCT
GGTCGAAGTCCTGTCTCTTCGGCGTAATCGCTCCGATAGCGGCCTGATCGCGCGTATTGCCGGCGACGCCATCGGGGCTG
ATCAATTCCTGCCAAATATGGCAACCGAAGACTTCCTTTCATGCCTTTCACGCACTGCGCTGGAGACGACCGCAGAAACG
GCGGGCGTGCCCGGTCGGATCAAGGTGAAGGATACCCGCGCGGCTCTGGTCGAGCATTTTGCCGAGGACAAGCTGGTGCA
TCCGGCAGCGCTGCTCGCGCCTTCCACGGACGACGTGCGGTCCTGGGCTGGACGTTTTGCCAGCGTCGATAGCGGATCGG
AGGATGTCCGCGACGATCTCGATGCGCTCGAAGATCAGCTTTCGGGTGGTGACCTGGTTGACCATTCCGCCGTCGAGGAA
GAGGCCGGCGAGGGTTTCCGCGAGGCCGCCGAATAG

Upstream 100 bases:

>100_bases
TTGCAGCCGCCGGCCCGTCCTGCGGTTCGGGAGATGTCTTCGAAAAGAAGATGAGGAGGCAAGGACAGTCCGTCCGCCCG
AAGCTCAAGAGGTCATTCCC

Downstream 100 bases:

>100_bases
CACAAGGCACAAGGATCTGAACCAACGCCGCTGGCTGATGCCGGCGGCGTTTTTGTTTCCAGCAATCAGAAGGAGTTTGT
CATGGCAGAGATCCATGATG

Product: plasmid partitioning protein

Products: NA

Alternate protein names: Plasmid Partitioning Protein; Nuclease; ParB Family Protein; Chromosome Partitioning Nuclease Protein ParB; ParB-Like Partition Protein; Orf_Bo

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MQLITADPRSLKDNPDRSRQSKSSPQSDALLCASIRAIGVVQPPIVKLDPEGGNSYIIVFGHRRAAQAIAADLVEIPLLL
ADPSDDLGAMQSFAENIAREPLNPVDQWCAIERLVALGWTEESIAMALALPSRQIRKLRFLANILPAMLDQMARGDMPNE
QQLRTIAAAGQDEQAEVWKKYKPKKQDPQVSWWEVARALTTTRMLAKHASFGDDLAQAYGITWVEDLFAPADEDSRYTTD
VEAFLGAQQEWLANNLPKRGSVIEANEYGQAKLPAKAQQVYGKPGKGDLTGWYINARDGSVQSVAYRMPEAKKPKLVKDL
DGVETIVEEVETPKVRPDVTQKGLDMIGDLRTDALHEALARAPIEDDTLMALLILAFTGMNVTVASGASDNPYGHAKCGP
HAARLIGEDGKLSFDRETLLQAARSVLVEVLSLRRNRSDSGLIARIAGDAIGADQFLPNMATEDFLSCLSRTALETTAET
AGVPGRIKVKDTRAALVEHFAEDKLVHPAALLAPSTDDVRSWAGRFASVDSGSEDVRDDLDALEDQLSGGDLVDHSAVEE
EAGEGFREAAE

Sequences:

>Translated_571_residues
MQLITADPRSLKDNPDRSRQSKSSPQSDALLCASIRAIGVVQPPIVKLDPEGGNSYIIVFGHRRAAQAIAADLVEIPLLL
ADPSDDLGAMQSFAENIAREPLNPVDQWCAIERLVALGWTEESIAMALALPSRQIRKLRFLANILPAMLDQMARGDMPNE
QQLRTIAAAGQDEQAEVWKKYKPKKQDPQVSWWEVARALTTTRMLAKHASFGDDLAQAYGITWVEDLFAPADEDSRYTTD
VEAFLGAQQEWLANNLPKRGSVIEANEYGQAKLPAKAQQVYGKPGKGDLTGWYINARDGSVQSVAYRMPEAKKPKLVKDL
DGVETIVEEVETPKVRPDVTQKGLDMIGDLRTDALHEALARAPIEDDTLMALLILAFTGMNVTVASGASDNPYGHAKCGP
HAARLIGEDGKLSFDRETLLQAARSVLVEVLSLRRNRSDSGLIARIAGDAIGADQFLPNMATEDFLSCLSRTALETTAET
AGVPGRIKVKDTRAALVEHFAEDKLVHPAALLAPSTDDVRSWAGRFASVDSGSEDVRDDLDALEDQLSGGDLVDHSAVEE
EAGEGFREAAE
>Mature_571_residues
MQLITADPRSLKDNPDRSRQSKSSPQSDALLCASIRAIGVVQPPIVKLDPEGGNSYIIVFGHRRAAQAIAADLVEIPLLL
ADPSDDLGAMQSFAENIAREPLNPVDQWCAIERLVALGWTEESIAMALALPSRQIRKLRFLANILPAMLDQMARGDMPNE
QQLRTIAAAGQDEQAEVWKKYKPKKQDPQVSWWEVARALTTTRMLAKHASFGDDLAQAYGITWVEDLFAPADEDSRYTTD
VEAFLGAQQEWLANNLPKRGSVIEANEYGQAKLPAKAQQVYGKPGKGDLTGWYINARDGSVQSVAYRMPEAKKPKLVKDL
DGVETIVEEVETPKVRPDVTQKGLDMIGDLRTDALHEALARAPIEDDTLMALLILAFTGMNVTVASGASDNPYGHAKCGP
HAARLIGEDGKLSFDRETLLQAARSVLVEVLSLRRNRSDSGLIARIAGDAIGADQFLPNMATEDFLSCLSRTALETTAET
AGVPGRIKVKDTRAALVEHFAEDKLVHPAALLAPSTDDVRSWAGRFASVDSGSEDVRDDLDALEDQLSGGDLVDHSAVEE
EAGEGFREAAE

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62079; Mature: 62079

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLITADPRSLKDNPDRSRQSKSSPQSDALLCASIRAIGVVQPPIVKLDPEGGNSYIIVF
CCEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEE
GHRRAAQAIAADLVEIPLLLADPSDDLGAMQSFAENIAREPLNPVDQWCAIERLVALGWT
CCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
EESIAMALALPSRQIRKLRFLANILPAMLDQMARGDMPNEQQLRTIAAAGQDEQAEVWKK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
YKPKKQDPQVSWWEVARALTTTRMLAKHASFGDDLAQAYGITWVEDLFAPADEDSRYTTD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCCCCCCHHH
VEAFLGAQQEWLANNLPKRGSVIEANEYGQAKLPAKAQQVYGKPGKGDLTGWYINARDGS
HHHHHCCHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCC
VQSVAYRMPEAKKPKLVKDLDGVETIVEEVETPKVRPDVTQKGLDMIGDLRTDALHEALA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAPIEDDTLMALLILAFTGMNVTVASGASDNPYGHAKCGPHAARLIGEDGKLSFDRETLL
HCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHH
QAARSVLVEVLSLRRNRSDSGLIARIAGDAIGADQFLPNMATEDFLSCLSRTALETTAET
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AGVPGRIKVKDTRAALVEHFAEDKLVHPAALLAPSTDDVRSWAGRFASVDSGSEDVRDDL
CCCCCEEEECHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
DALEDQLSGGDLVDHSAVEEEAGEGFREAAE
HHHHHHCCCCCCCCHHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MQLITADPRSLKDNPDRSRQSKSSPQSDALLCASIRAIGVVQPPIVKLDPEGGNSYIIVF
CCEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEE
GHRRAAQAIAADLVEIPLLLADPSDDLGAMQSFAENIAREPLNPVDQWCAIERLVALGWT
CCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
EESIAMALALPSRQIRKLRFLANILPAMLDQMARGDMPNEQQLRTIAAAGQDEQAEVWKK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
YKPKKQDPQVSWWEVARALTTTRMLAKHASFGDDLAQAYGITWVEDLFAPADEDSRYTTD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCCCCCCHHH
VEAFLGAQQEWLANNLPKRGSVIEANEYGQAKLPAKAQQVYGKPGKGDLTGWYINARDGS
HHHHHCCHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCC
VQSVAYRMPEAKKPKLVKDLDGVETIVEEVETPKVRPDVTQKGLDMIGDLRTDALHEALA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAPIEDDTLMALLILAFTGMNVTVASGASDNPYGHAKCGPHAARLIGEDGKLSFDRETLL
HCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHH
QAARSVLVEVLSLRRNRSDSGLIARIAGDAIGADQFLPNMATEDFLSCLSRTALETTAET
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AGVPGRIKVKDTRAALVEHFAEDKLVHPAALLAPSTDDVRSWAGRFASVDSGSEDVRDDL
CCCCCEEEECHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
DALEDQLSGGDLVDHSAVEEEAGEGFREAAE
HHHHHHCCCCCCCCHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA