| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is 222102435
Identifier: 222102435
GI number: 222102435
Start: 31376
End: 31669
Strand: Direct
Name: 222102435
Synonym: Avi_7033
Alternate gene names: NA
Gene position: 31376-31669 (Clockwise)
Preceding gene: 222102434
Following gene: 222102437
Centisome position: 4.97
GC content: 60.88
Gene sequence:
>294_bases CTGCTGCAACGTACAGGTGGCGATTACGAGATCGACTTGTCCGTGACCACGACGCCGATTGGCGCGATCTCCCGGCTCGA ACATGCTCTCGGCGGGTTTGAACATGAGCGCGAGAACTATCGCAATCGGCTCGCCGATGCGAAACGTCGCCTCGCCTCCT ACACACCGCGTCTGGGGGAAAGCTTCTCATTCCAAGCCGAGCTCGAACTCAAGCTGGGCCAACTGGACGAGATCGAGAGG GATCTGGCGGCAACCGCCGACGAACCAGAGGAGGATCGCCAGGAAGCCGCGTAA
Upstream 100 bases:
>100_bases CAACGTAAGTTCTGGCTCAGTGCATAACGACAAACGTGATTAATTTAGCGCGGAAATCAACAGCGAGCGTTTCGGCAAGG ACGGTTATCGCTACGACACG
Downstream 100 bases:
>100_bases ACAGCGGCATTTCCACCGTCACTTGAAACGCGATCGGGTCATACACATCTACCGGTCATCACGCGTTTCGACGGTTTCAT GCAGTGGCGATTGCCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Helicase SNF2 Family; Helicase-Like; N-6 DNA Methylase Family; Methyltransferase Type; SNF-2-Family Methyltransferase; Helicase Domain-Containing Protein; DNA Adenine Methyltransferase; DNA Methylase; Orf_Bo; Methylase Protein; Methylase
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MLQRTGGDYEIDLSVTTTPIGAISRLEHALGGFEHERENYRNRLADAKRRLASYTPRLGESFSFQAELELKLGQLDEIER DLAATADEPEEDRQEAA
Sequences:
>Translated_97_residues MLQRTGGDYEIDLSVTTTPIGAISRLEHALGGFEHERENYRNRLADAKRRLASYTPRLGESFSFQAELELKLGQLDEIER DLAATADEPEEDRQEAA >Mature_97_residues MLQRTGGDYEIDLSVTTTPIGAISRLEHALGGFEHERENYRNRLADAKRRLASYTPRLGESFSFQAELELKLGQLDEIER DLAATADEPEEDRQEAA
Specific function: Unknown
COG id: COG4646
COG function: function code KL; DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10951; Mature: 10951
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRTGGDYEIDLSVTTTPIGAISRLEHALGGFEHERENYRNRLADAKRRLASYTPRLGE CCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC SFSFQAELELKLGQLDEIERDLAATADEPEEDRQEAA CCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHCCC >Mature Secondary Structure MLQRTGGDYEIDLSVTTTPIGAISRLEHALGGFEHERENYRNRLADAKRRLASYTPRLGE CCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC SFSFQAELELKLGQLDEIERDLAATADEPEEDRQEAA CCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA