Click here to switch to the map view.

The map label for this gene is 222102434

Identifier: 222102434

GI number: 222102434

Start: 30546

End: 31193

Strand: Direct

Name: 222102434

Synonym: Avi_7032

Alternate gene names: NA

Gene position: 30546-31193 (Clockwise)

Preceding gene: 222102428

Following gene: 222102435

Centisome position: 4.83

GC content: 51.85

Gene sequence:

>648_bases
ATGGCAGAGGTAGGGAATACGGGCACCAAACGGAGGCCGGTTCAGGCAAGATCACAAAAAATGAAGATGGCGATTATGGA
ATCGACCCATGCCGTGATGCGTGAACAGGGTGTGCGCGCCGTGACCACCAATGCCGTTTCTGCCCATTCTGGTATTAAGG
TCGGCTCGATTTATGACTACTTCCCCAACAAGGAAGCCATTATTGCCGAAATCTATGAGGAAAAGTTGGCGCAGGTGCGG
GCTTTTCTGGAAGCCGGATCAGAAAAAATCGAGGCAGATGACTGGCAGATCCAATTGGCTGCACTTATTCGTGAGACATG
GGTTTACCAGCTGTCGATCGGGCTGGACCGCACCATTGTTGATGCTGCTTATTATTATGAGACCCTGTTTCCCATTGCCC
AGCAGCATGCAAGGTTGGTTGCCTCAAACTACGTGGAGCTGTTGTCCCATCTTGGCTCAACCTGGTCGCATGAGCAACTT
TTTGATCTGGGTATCAGCCTTTACACGCTCGTCAACGCCAATTGGAGTTATTGGCGTTTGACAGGCACGGATGATCAAAT
CGCGATCGAGCGACAGATCGTGTTGACGATCACGCTGATCACGCCCACCCTGACAGCCTCGGCAAGCTCTCATAGCCCAG
CGTGTTGA

Upstream 100 bases:

>100_bases
GCGTTCATATAATCCGAATGATTATCCGGTTTTTTCCTTTGCGCAAGACGGATATTTATCCGATGTATGATTGCAGGTGA
GTGATGACGGGGGTAACGGT

Downstream 100 bases:

>100_bases
TTTTCGCTTAGAAATGAGCCGTATTTCCACTTGGGCCTGATCCGGTCTGCCACTAGTAGTGATTTGAAAGGATTGATCAG
TTCAACGTAAGTTCTGGCTC

Product: transcriptional regulator TetR family

Products: NA

Alternate protein names: HTH-Type Transcriptional Regulator BetI

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MAEVGNTGTKRRPVQARSQKMKMAIMESTHAVMREQGVRAVTTNAVSAHSGIKVGSIYDYFPNKEAIIAEIYEEKLAQVR
AFLEAGSEKIEADDWQIQLAALIRETWVYQLSIGLDRTIVDAAYYYETLFPIAQQHARLVASNYVELLSHLGSTWSHEQL
FDLGISLYTLVNANWSYWRLTGTDDQIAIERQIVLTITLITPTLTASASSHSPAC

Sequences:

>Translated_215_residues
MAEVGNTGTKRRPVQARSQKMKMAIMESTHAVMREQGVRAVTTNAVSAHSGIKVGSIYDYFPNKEAIIAEIYEEKLAQVR
AFLEAGSEKIEADDWQIQLAALIRETWVYQLSIGLDRTIVDAAYYYETLFPIAQQHARLVASNYVELLSHLGSTWSHEQL
FDLGISLYTLVNANWSYWRLTGTDDQIAIERQIVLTITLITPTLTASASSHSPAC
>Mature_214_residues
AEVGNTGTKRRPVQARSQKMKMAIMESTHAVMREQGVRAVTTNAVSAHSGIKVGSIYDYFPNKEAIIAEIYEEKLAQVRA
FLEAGSEKIEADDWQIQLAALIRETWVYQLSIGLDRTIVDAAYYYETLFPIAQQHARLVASNYVELLSHLGSTWSHEQLF
DLGISLYTLVNANWSYWRLTGTDDQIAIERQIVLTITLITPTLTASASSHSPAC

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24054; Mature: 23922

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVGNTGTKRRPVQARSQKMKMAIMESTHAVMREQGVRAVTTNAVSAHSGIKVGSIYDY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHCCCCEECCEEEC
FPNKEAIIAEIYEEKLAQVRAFLEAGSEKIEADDWQIQLAALIRETWVYQLSIGLDRTIV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCHHHH
DAAYYYETLFPIAQQHARLVASNYVELLSHLGSTWSHEQLFDLGISLYTLVNANWSYWRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEECCCCEEEE
TGTDDQIAIERQIVLTITLITPTLTASASSHSPAC
ECCCCCEEEEEEEEEEEEEECCCEECCCCCCCCCC
>Mature Secondary Structure 
AEVGNTGTKRRPVQARSQKMKMAIMESTHAVMREQGVRAVTTNAVSAHSGIKVGSIYDY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHCCCCEECCEEEC
FPNKEAIIAEIYEEKLAQVRAFLEAGSEKIEADDWQIQLAALIRETWVYQLSIGLDRTIV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCHHHH
DAAYYYETLFPIAQQHARLVASNYVELLSHLGSTWSHEQLFDLGISLYTLVNANWSYWRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEECCCCEEEE
TGTDDQIAIERQIVLTITLITPTLTASASSHSPAC
ECCCCCEEEEEEEEEEEEEECCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA