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The map label for this gene is yezE [H]

Identifier: 222096683

GI number: 222096683

Start: 2975380

End: 2975976

Strand: Reverse

Name: yezE [H]

Synonym: BCQ_3023

Alternate gene names: 222096683

Gene position: 2975976-2975380 (Counterclockwise)

Preceding gene: 222096684

Following gene: 222096682

Centisome position: 57.07

GC content: 34.84

Gene sequence:

>597_bases
TTGAATAAACGCGGCAGACCTCGAGAGTTTGATTATTCCTCAATTGTAGATGTTGCAATGAAAACATTTTGGTTAAGAGG
ATATGAAGGGTGTTCTACACAAGATTTATGCAGTGATACAGGACTTGGAAAAGGAAGTTTATACAATACTTTCGGTAGTA
AACATGAACTGTATAAACAAGTATTAGAACGCTACCATGAAATTGGGATTAAGGAACAAAGGAAATTGTTACATACTCCA
ATTCCAGTTAAAGAACGATTAAGTAATTTTTTTGAATGGGCATTGAAAGAAGACTTTGAGAATATTGATCAAAAAGGATG
TTTATTGATTAATGCCAGTATAGAACGTGCTAAAAACGATTTAATGGTACAAGAAATTTTCTCGAAGCATGTTGAACTTC
TTAAACAAGCTATTGAAACAGTGATGGAGGAAGGATTGCAAACAGGTGAAATTTCAAAGAAGCAATCAGCTGAGGAATTA
GCTAGTCTGCTTTTAAGCAGTTATTACGGATTCCGTGTTCTTAATGTATCGATGCAAAATCGGATGTTGTCTGAACAAGT
TATCAAAGGAACAGTGGAGTCTATTTGTGGCGCTTAG

Upstream 100 bases:

>100_bases
CAAATTTAATTTTACAGTAACAATAAAATAAATTATTGACCGCGTGGTACAAAAAAGAGTATTCTATTCATGTTATCTTT
AAAATGAGAGGAGGATACGA

Downstream 100 bases:

>100_bases
TGCGCTCTTTTTTCGCACTATTTTTGTACCGATCATTACAATAATGAATAAGGAGTGTTTTTATGCCATCGATTATTTAT
TTATTAGCTTTAGCAATCTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MNKRGRPREFDYSSIVDVAMKTFWLRGYEGCSTQDLCSDTGLGKGSLYNTFGSKHELYKQVLERYHEIGIKEQRKLLHTP
IPVKERLSNFFEWALKEDFENIDQKGCLLINASIERAKNDLMVQEIFSKHVELLKQAIETVMEEGLQTGEISKKQSAEEL
ASLLLSSYYGFRVLNVSMQNRMLSEQVIKGTVESICGA

Sequences:

>Translated_198_residues
MNKRGRPREFDYSSIVDVAMKTFWLRGYEGCSTQDLCSDTGLGKGSLYNTFGSKHELYKQVLERYHEIGIKEQRKLLHTP
IPVKERLSNFFEWALKEDFENIDQKGCLLINASIERAKNDLMVQEIFSKHVELLKQAIETVMEEGLQTGEISKKQSAEEL
ASLLLSSYYGFRVLNVSMQNRMLSEQVIKGTVESICGA
>Mature_198_residues
MNKRGRPREFDYSSIVDVAMKTFWLRGYEGCSTQDLCSDTGLGKGSLYNTFGSKHELYKQVLERYHEIGIKEQRKLLHTP
IPVKERLSNFFEWALKEDFENIDQKGCLLINASIERAKNDLMVQEIFSKHVELLKQAIETVMEEGLQTGEISKKQSAEEL
ASLLLSSYYGFRVLNVSMQNRMLSEQVIKGTVESICGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081833, Length=163, Percent_Identity=28.8343558282209, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22668; Mature: 22668

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRGRPREFDYSSIVDVAMKTFWLRGYEGCSTQDLCSDTGLGKGSLYNTFGSKHELYKQ
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHCCCHHHHHHH
VLERYHEIGIKEQRKLLHTPIPVKERLSNFFEWALKEDFENIDQKGCLLINASIERAKND
HHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHH
LMVQEIFSKHVELLKQAIETVMEEGLQTGEISKKQSAEELASLLLSSYYGFRVLNVSMQN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMLSEQVIKGTVESICGA
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKRGRPREFDYSSIVDVAMKTFWLRGYEGCSTQDLCSDTGLGKGSLYNTFGSKHELYKQ
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHCCCHHHHHHH
VLERYHEIGIKEQRKLLHTPIPVKERLSNFFEWALKEDFENIDQKGCLLINASIERAKND
HHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHH
LMVQEIFSKHVELLKQAIETVMEEGLQTGEISKKQSAEELASLLLSSYYGFRVLNVSMQN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMLSEQVIKGTVESICGA
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]