Click here to switch to the map view.

The map label for this gene is ycnE [H]

Identifier: 222096508

GI number: 222096508

Start: 2788957

End: 2789250

Strand: Reverse

Name: ycnE [H]

Synonym: BCQ_2848

Alternate gene names: 222096508

Gene position: 2789250-2788957 (Counterclockwise)

Preceding gene: 222096509

Following gene: 222096507

Centisome position: 53.49

GC content: 32.99

Gene sequence:

>294_bases
ATGATTATTATTCACGCAATATTTCAAGTAGATCCAGCGAAACAACAATCATTTTTAGAAGAGATTCGTCCGCTGATTCA
TAGTTCAAGAGAAGAAAGTGGAAATATTTCTTATGACTTGTATAAGGACATAGAAAAAGAAAATGTGTATACAATGGTTG
AAGTGTGGAAAGATGAAGCAGCAGTTGCGAGTCATAATACGAGTGAACACTTCACATCTTTCGTTAGCAAAGTAAAACAG
TTTTTAACTGCTCCTCTTGATATAACAGCTTATAATGGAGAGTTAGTAAAATAA

Upstream 100 bases:

>100_bases
AGTGGTTACCAATCAGTACGTCTTCCAATTGAAAAAGTTGCAGAGTGGAAATAATTTTATAAAAGAACTTCAATAAGTGA
AAGATGAGAGGGGAAACACC

Downstream 100 bases:

>100_bases
TGAGAAAGATGACTTTAGCTTATAGTGCTAAGGTCATCTTTTTTATTTTGACAGGAATATATTTACTTTTACCGTAATGT
GTTATAATTTGGAAAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MIIIHAIFQVDPAKQQSFLEEIRPLIHSSREESGNISYDLYKDIEKENVYTMVEVWKDEAAVASHNTSEHFTSFVSKVKQ
FLTAPLDITAYNGELVK

Sequences:

>Translated_97_residues
MIIIHAIFQVDPAKQQSFLEEIRPLIHSSREESGNISYDLYKDIEKENVYTMVEVWKDEAAVASHNTSEHFTSFVSKVKQ
FLTAPLDITAYNGELVK
>Mature_97_residues
MIIIHAIFQVDPAKQQSFLEEIRPLIHSSREESGNISYDLYKDIEKENVYTMVEVWKDEAAVASHNTSEHFTSFVSKVKQ
FLTAPLDITAYNGELVK

Specific function: Putative monooxygenase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lsrG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 11132; Mature: 11132

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIIHAIFQVDPAKQQSFLEEIRPLIHSSREESGNISYDLYKDIEKENVYTMVEVWKDEA
CEEEEEEHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH
AVASHNTSEHFTSFVSKVKQFLTAPLDITAYNGELVK
HHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCEECC
>Mature Secondary Structure
MIIIHAIFQVDPAKQQSFLEEIRPLIHSSREESGNISYDLYKDIEKENVYTMVEVWKDEA
CEEEEEEHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH
AVASHNTSEHFTSFVSKVKQFLTAPLDITAYNGELVK
HHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]