Click here to switch to the map view.

The map label for this gene is ydgI [H]

Identifier: 222096509

GI number: 222096509

Start: 2789297

End: 2789935

Strand: Reverse

Name: ydgI [H]

Synonym: BCQ_2849

Alternate gene names: 222096509

Gene position: 2789935-2789297 (Counterclockwise)

Preceding gene: 222096510

Following gene: 222096508

Centisome position: 53.51

GC content: 38.18

Gene sequence:

>639_bases
ATGACTAACTCAGTAAAAACAAATGATTTTAACGAAATTTTAACAGGACGTCGTTCCATTCGTAAGTACGACTCATCAGT
GAAAATTAGCAAAGAAGAAATGACAGAAATTCTTACAGAAGCAACACTTGCGCCATCTTCAGTAAACATGCAACCATGGA
GATTCGTAGTGATTGAAAGTGACGAAGCGAAAGCAACACTTGCACCACTTGCGAAATTCAATCAATCTCAAGTAGAAACA
TCTTCAGCAATGATCGCTTTATTTGGTGATTTAAACAACTTTGATAACGCAGAAGAAATTTACGGTACAGCAGTAGAGCG
CGGTTTCATGCCAGCAGAAGTAAAAGAAGACCAAATGAAAAAACTTTCAGCTTACTTCTCAATGGTTACACCAGAAGTAA
TGAAAGATACTGTACTTATTGACGGCGGTCTTGTAGCAATGCAATTTATGCTAGCAGCTCGTGCTCACGGCTATGATACT
TGTCCAATTGGTGGTTTTGAAAAAGACCAAATTGCTGAAGCGTTCGGATTAGATAAAGAACGTTACGTACCAGTTATGTT
AATTTCAATCGGAAAAGCAGCTGACAGTGGTTACCAATCAGTACGTCTTCCAATTGAAAAAGTTGCAGAGTGGAAATAA

Upstream 100 bases:

>100_bases
ATTTAAAGGATTAAGTGAAGAAGAACGCGATAATCTTTTAAATATGTTAAATCACATTCAAGAAAATATAAAAGAATTAT
AAAAAAGGGAGAATACAACT

Downstream 100 bases:

>100_bases
TTTTATAAAAGAACTTCAATAAGTGAAAGATGAGAGGGGAAACACCATGATTATTATTCACGCAATATTTCAAGTAGATC
CAGCGAAACAACAATCATTT

Product: nitroreductase family protein

Products: NAD(P)(+); @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTNSVKTNDFNEILTGRRSIRKYDSSVKISKEEMTEILTEATLAPSSVNMQPWRFVVIESDEAKATLAPLAKFNQSQVET
SSAMIALFGDLNNFDNAEEIYGTAVERGFMPAEVKEDQMKKLSAYFSMVTPEVMKDTVLIDGGLVAMQFMLAARAHGYDT
CPIGGFEKDQIAEAFGLDKERYVPVMLISIGKAADSGYQSVRLPIEKVAEWK

Sequences:

>Translated_212_residues
MTNSVKTNDFNEILTGRRSIRKYDSSVKISKEEMTEILTEATLAPSSVNMQPWRFVVIESDEAKATLAPLAKFNQSQVET
SSAMIALFGDLNNFDNAEEIYGTAVERGFMPAEVKEDQMKKLSAYFSMVTPEVMKDTVLIDGGLVAMQFMLAARAHGYDT
CPIGGFEKDQIAEAFGLDKERYVPVMLISIGKAADSGYQSVRLPIEKVAEWK
>Mature_211_residues
TNSVKTNDFNEILTGRRSIRKYDSSVKISKEEMTEILTEATLAPSSVNMQPWRFVVIESDEAKATLAPLAKFNQSQVETS
SAMIALFGDLNNFDNAEEIYGTAVERGFMPAEVKEDQMKKLSAYFSMVTPEVMKDTVLIDGGLVAMQFMLAARAHGYDTC
PIGGFEKDQIAEAFGLDKERYVPVMLISIGKAADSGYQSVRLPIEKVAEWK

Specific function: Reduction Of A Variety Of Nitroaromatic Compounds Using NADH (And To Lesser Extent Nadph) As Source Of Reducing Equivalents; Two Electrons Are Transferred. Capable Of Reducing Nitrofurazone, Quinones And The Anti-Tumor Agent Cb1954 (5- (Aziridin-1-Yl)-2,4

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 23543; Mature: 23412

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSVKTNDFNEILTGRRSIRKYDSSVKISKEEMTEILTEATLAPSSVNMQPWRFVVIES
CCCCCCCCCHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC
DEAKATLAPLAKFNQSQVETSSAMIALFGDLNNFDNAEEIYGTAVERGFMPAEVKEDQMK
CCCHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
KLSAYFSMVTPEVMKDTVLIDGGLVAMQFMLAARAHGYDTCPIGGFEKDQIAEAFGLDKE
HHHHHHHHHCHHHHHCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCH
RYVPVMLISIGKAADSGYQSVRLPIEKVAEWK
HCCCEEEEEECCCCCCCCHHCCCCHHHHCCCC
>Mature Secondary Structure 
TNSVKTNDFNEILTGRRSIRKYDSSVKISKEEMTEILTEATLAPSSVNMQPWRFVVIES
CCCCCCCCHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC
DEAKATLAPLAKFNQSQVETSSAMIALFGDLNNFDNAEEIYGTAVERGFMPAEVKEDQMK
CCCHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
KLSAYFSMVTPEVMKDTVLIDGGLVAMQFMLAARAHGYDTCPIGGFEKDQIAEAFGLDKE
HHHHHHHHHCHHHHHCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCH
RYVPVMLISIGKAADSGYQSVRLPIEKVAEWK
HCCCEEEEEECCCCCCCCHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FMN. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NAD(P)H; 6,7-Dihydropteridine [C]

Specific reaction: NAD(P)H + 6,7-Dihydropteridine = NAD(P)(+) + @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]