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The map label for this gene is pepF [H]

Identifier: 222096121

GI number: 222096121

Start: 2421154

End: 2422845

Strand: Reverse

Name: pepF [H]

Synonym: BCQ_2461

Alternate gene names: 222096121

Gene position: 2422845-2421154 (Counterclockwise)

Preceding gene: 222096128

Following gene: 222096113

Centisome position: 46.47

GC content: 29.73

Gene sequence:

>1692_bases
ATGCAGCGTTTAAATACGATTGATATTAGTAACGTTCTAGAATTAGAAAATACTCTTTCTACTTTATTGAATGAAATGAT
TTCTTCAAAGCTAGAACTTGAAAACTGGTTAAAAAAACAGTCTACTTTCATTTGGGGAATTGAAGAACAATTAAGGTCGC
ACTATATCGCTTTTCAATGTAATACAGATAATAAAGAAATAAAAGATACTTTTGAATATGATCAAAAATATGTACGACCT
CTTTTGAAACGTTATCAAAATTCATTTGATACTAAATATTTAGAGTCCCCTTTTCGAATGGAACTTGATCCAAAAACGTA
CAGCTTACTAGATAAAAAAATTAAGAATGCGCAAACATTATTTTGTGAAAAGAATATTGATTTAGAAGTGAACGAAGACA
AATTAGTAACCGAATACTTCGAAATCACAGGTGGTTTAACTGCATTATGGAACGGTGAAGAAAAAACAATTACTGAACTA
CAATCTTACTTACAAGATCCGAATCGTCATATACGAAAAAAAGCAAAAACGCTCATTTCTGAAACATTCTTATCTGTTGA
AGATAAATTACAACATATATTAAATGAATTAATCGTAATCCGTGACCAAAAAGCAAAAAACATTCAATTACATAATTATC
GTGATTATATGTTTAAAAAACATGAACGTTTTGATTATACACCTGAAGACTGCTATGAGCTTGCTGAATCTATTCGTAAA
TACGTAGTACCACTTATCGATAAAATATATAATAAGAAAAAATCTGAACTTCAAGTAGTAAGTCTTCATCCATGGGATTT
AAAAGCAACTGCACCAAATCAAAAAGTATTAAAACCTATTGAAAAAGCGAGTGATTTAATCGAAAAAAGTTCTCATATTT
TACACAAACTTGCCCCTGAATTTTCCGCATTACTGGAACGTATGCATAAAAATAATTGCTTAGATTTAGAAAGTCGTAAA
GGAAAAGGACCAGGAGGATTTTGCGAATATTTACCTGCATCTCAATTATCTTTTATTTTCATGAATCTCAATCATACACA
TTATGATGTTACTACTTTCCTCCATGAAATGGGCCATAGTATTCATAATGATTGTATGAAGCAGTTAGAACTTCAAAAGT
ATTTAGAAATCCCTTCAGAATCAGCTGAACTAGCTAGTATGACAATGGAATTGTTTTCGATGGAGTATTGGGATACTTTT
TATGAAAATAAAGAAGAATTTATAGAAGTAAAATTAGAGTTCTTTAAAGATATTGTTAAATATTTGCCACAAATGCTTAT
AGTTGATCAATTCCAACATTGGATGTATGAAAATCCTAATCATACAGCTAAAGAAAGAAATGAAAAATATTTAGAATTAC
ATAACACTTATCAATCGAATGTAGTAAATATTGAGGGGTATGAAAATTGGGTTGCAACTGGCTGGTTACCTGTGCTACAT
ATATTCGAAATACCATTCTATTACATTGAATATGCAATTGCACAACTTGGTGCGCTGCAAATGTATAAACAATATAAAGA
AAATCCTAAACAAGCACTTGAAAATTATAAAAAGGCCTTATCATTAGGTAGCTCTAAATCTTTAACAGAAGTATATGAAG
CTGCTGGAATTCGTTTTGATTTTTCTAGCGAAACAATTAAGGAACTAATGGCATTTGTAGAAAAAGAATTAGAATTACTT
GAGCAATTATAA

Upstream 100 bases:

>100_bases
TTTAAATTTAACATTTTTTCACATTTTCTCCTCTTAAAAAGGAAATTATAATTAATAAATAGAATATCTTCATGAATAAA
TAAAAAGTGAGGGATATGTC

Downstream 100 bases:

>100_bases
GAAGAAAGCTGCACCTATATTTTTGGTGTAGCTTTCTTCTTTATTTTATTAATCAGCTCTATATACTGAGAATCACCATA
TCCGATTGTTGGAAATAGTT

Product: oligoendopeptidase f

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MQRLNTIDISNVLELENTLSTLLNEMISSKLELENWLKKQSTFIWGIEEQLRSHYIAFQCNTDNKEIKDTFEYDQKYVRP
LLKRYQNSFDTKYLESPFRMELDPKTYSLLDKKIKNAQTLFCEKNIDLEVNEDKLVTEYFEITGGLTALWNGEEKTITEL
QSYLQDPNRHIRKKAKTLISETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
YVVPLIDKIYNKKKSELQVVSLHPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLAPEFSALLERMHKNNCLDLESRK
GKGPGGFCEYLPASQLSFIFMNLNHTHYDVTTFLHEMGHSIHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTF
YENKEEFIEVKLEFFKDIVKYLPQMLIVDQFQHWMYENPNHTAKERNEKYLELHNTYQSNVVNIEGYENWVATGWLPVLH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALENYKKALSLGSSKSLTEVYEAAGIRFDFSSETIKELMAFVEKELELL
EQL

Sequences:

>Translated_563_residues
MQRLNTIDISNVLELENTLSTLLNEMISSKLELENWLKKQSTFIWGIEEQLRSHYIAFQCNTDNKEIKDTFEYDQKYVRP
LLKRYQNSFDTKYLESPFRMELDPKTYSLLDKKIKNAQTLFCEKNIDLEVNEDKLVTEYFEITGGLTALWNGEEKTITEL
QSYLQDPNRHIRKKAKTLISETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
YVVPLIDKIYNKKKSELQVVSLHPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLAPEFSALLERMHKNNCLDLESRK
GKGPGGFCEYLPASQLSFIFMNLNHTHYDVTTFLHEMGHSIHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTF
YENKEEFIEVKLEFFKDIVKYLPQMLIVDQFQHWMYENPNHTAKERNEKYLELHNTYQSNVVNIEGYENWVATGWLPVLH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALENYKKALSLGSSKSLTEVYEAAGIRFDFSSETIKELMAFVEKELELL
EQL
>Mature_563_residues
MQRLNTIDISNVLELENTLSTLLNEMISSKLELENWLKKQSTFIWGIEEQLRSHYIAFQCNTDNKEIKDTFEYDQKYVRP
LLKRYQNSFDTKYLESPFRMELDPKTYSLLDKKIKNAQTLFCEKNIDLEVNEDKLVTEYFEITGGLTALWNGEEKTITEL
QSYLQDPNRHIRKKAKTLISETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
YVVPLIDKIYNKKKSELQVVSLHPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLAPEFSALLERMHKNNCLDLESRK
GKGPGGFCEYLPASQLSFIFMNLNHTHYDVTTFLHEMGHSIHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTF
YENKEEFIEVKLEFFKDIVKYLPQMLIVDQFQHWMYENPNHTAKERNEKYLELHNTYQSNVVNIEGYENWVATGWLPVLH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALENYKKALSLGSSKSLTEVYEAAGIRFDFSSETIKELMAFVEKELELL
EQL

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 66701; Mature: 66701

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLNTIDISNVLELENTLSTLLNEMISSKLELENWLKKQSTFIWGIEEQLRSHYIAFQC
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHCCEEEEEE
NTDNKEIKDTFEYDQKYVRPLLKRYQNSFDTKYLESPFRMELDPKTYSLLDKKIKNAQTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCHHHHHHHHHHHHHHHE
FCEKNIDLEVNEDKLVTEYFEITGGLTALWNGEEKTITELQSYLQDPNRHIRKKAKTLIS
EEECCCCEEECCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
ETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
YVVPLIDKIYNKKKSELQVVSLHPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLAPE
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSALLERMHKNNCLDLESRKGKGPGGFCEYLPASQLSFIFMNLNHTHYDVTTFLHEMGHS
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
IHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTFYENKEEFIEVKLEFFKDIVK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YLPQMLIVDQFQHWMYENPNHTAKERNEKYLELHNTYQSNVVNIEGYENWVATGWLPVLH
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALENYKKALSLGSSKSLTEVYEAAGIRFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEE
FSSETIKELMAFVEKELELLEQL
CCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRLNTIDISNVLELENTLSTLLNEMISSKLELENWLKKQSTFIWGIEEQLRSHYIAFQC
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHCCEEEEEE
NTDNKEIKDTFEYDQKYVRPLLKRYQNSFDTKYLESPFRMELDPKTYSLLDKKIKNAQTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCHHHHHHHHHHHHHHHE
FCEKNIDLEVNEDKLVTEYFEITGGLTALWNGEEKTITELQSYLQDPNRHIRKKAKTLIS
EEECCCCEEECCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
ETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
YVVPLIDKIYNKKKSELQVVSLHPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLAPE
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSALLERMHKNNCLDLESRKGKGPGGFCEYLPASQLSFIFMNLNHTHYDVTTFLHEMGHS
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
IHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTFYENKEEFIEVKLEFFKDIVK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YLPQMLIVDQFQHWMYENPNHTAKERNEKYLELHNTYQSNVVNIEGYENWVATGWLPVLH
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALENYKKALSLGSSKSLTEVYEAAGIRFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEE
FSSETIKELMAFVEKELELLEQL
CCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7569993; 8253680 [H]