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The map label for this gene is yfmR [H]

Identifier: 222095796

GI number: 222095796

Start: 2105581

End: 2106816

Strand: Direct

Name: yfmR [H]

Synonym: BCQ_2136

Alternate gene names: 222095796

Gene position: 2105581-2106816 (Clockwise)

Preceding gene: 222095795

Following gene: 222095797

Centisome position: 40.38

GC content: 37.7

Gene sequence:

>1236_bases
GTGACGAATCGTATTTTCGAATTAGATAATGGAAAATTGTATAGTTATGAAGGGAATTACAGTACGTTTTTAGAAGCGAA
AGCACTTCGTGAAGAACAAGAACTTGCACAAGAATCAAAACGTCAAAACTTATATCGCCGTGAACTAGCTTGGATTCGCC
GTGGTGCAAAAGCTCGTTCGACAAAGCAAAAGGCACGTATTCAACGATTTGAAGAGTTAAAAGGTCAAGAAGGTCCAGCT
GCAAAACAGTCAGTTGATATTGCGCTTAGCGGTAGTCGCCTTGGAAAAAAAGTACTTGAGTTAAAAGATGTAACGAAAAA
ATTTGGCGATAAAACAGTATTAAACAACTTCAATCATATCGTGAAACCAGGCGATCGTATCGGAATTATTGGAGCGAATG
GAAGCGGGAAATCTTCGCTATTAAATATGCTTGCAGGTAAAATATCTCCTGATAGTGGTGAAATTGAAGTTGGGCAAACA
GTAAAAATCGCTTACTATACGCAAGAAAATGAAGAGATGAATTTAAATCAACGTATGATTGAATACATTAAAGAAATCGC
GGAAGTCATTCATACGACAGACGGAAAAGTAATTGGTGCGTCTCAAATGTTAGAACGTTTCTTATTCCCACCACATTCAC
ATGGTACACCGCTTGGCAAATTATCTGGCGGTGAAAGAAGACGTTTATACTTATTACGTATATTAATGGGAGAACCGAAC
GTACTATTACTGGATGAGCCTACGAATGATTTAGATACACAAACATTAACGGTGTTAGAAGATTATTTAGAAGATTTCCC
AGGTGTCGTTTTAACTGTATCGCATGACCGTTACTTCTTAGATAAAGTAGTAGATGAATTGTTCATCTTTACGGGAGAAG
GAGAAGTGCGCGAATTTCTAGGTAGTTATACTGATTACTTAGAAATGGAAAAAACGAGAGAACTTATTGAGAAAGCGGAA
GTGCAGAAAGAGAAAAAAGTGGTAGAAGAAGCACCGAAACAACAACGTAAGCGTAAACTTTCATATAACGAGCAGCGCGA
ATGGGAAACTATTGAAGATACAATTGCGGAACTTGAAGAAAAGCTAGAATCAATTGGAGAAGAGCTTGCGAATGTTGGTT
CTGATTTTACGAAAGCGCAAGAATTGTCTGAAGCACAGCAGAAAACAGAAGAAGAGCTAGAAAAAACGATGGAAAGATGG
AGTGAACTATCGGACATTGTTGAAGGATTAAAATAA

Upstream 100 bases:

>100_bases
ATCCTACGACCATGAGACAGTTGAGTGGTTAGAGGAATATTTAGCAAGGTACACAGGTGCGGTATTACTTGTAACCCATG
ATCGTTATTTCTTAGATCGT

Downstream 100 bases:

>100_bases
AAACAAGCTGCATATATTGAAAAGTAAAGAGAAAAACTTTACACTATTGGTAGAACCTATTTTAGGAGGGAAAAAATGAG
AACATCTAATCCAATGTTGA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTNRIFELDNGKLYSYEGNYSTFLEAKALREEQELAQESKRQNLYRRELAWIRRGAKARSTKQKARIQRFEELKGQEGPA
AKQSVDIALSGSRLGKKVLELKDVTKKFGDKTVLNNFNHIVKPGDRIGIIGANGSGKSSLLNMLAGKISPDSGEIEVGQT
VKIAYYTQENEEMNLNQRMIEYIKEIAEVIHTTDGKVIGASQMLERFLFPPHSHGTPLGKLSGGERRRLYLLRILMGEPN
VLLLDEPTNDLDTQTLTVLEDYLEDFPGVVLTVSHDRYFLDKVVDELFIFTGEGEVREFLGSYTDYLEMEKTRELIEKAE
VQKEKKVVEEAPKQQRKRKLSYNEQREWETIEDTIAELEEKLESIGEELANVGSDFTKAQELSEAQQKTEEELEKTMERW
SELSDIVEGLK

Sequences:

>Translated_411_residues
MTNRIFELDNGKLYSYEGNYSTFLEAKALREEQELAQESKRQNLYRRELAWIRRGAKARSTKQKARIQRFEELKGQEGPA
AKQSVDIALSGSRLGKKVLELKDVTKKFGDKTVLNNFNHIVKPGDRIGIIGANGSGKSSLLNMLAGKISPDSGEIEVGQT
VKIAYYTQENEEMNLNQRMIEYIKEIAEVIHTTDGKVIGASQMLERFLFPPHSHGTPLGKLSGGERRRLYLLRILMGEPN
VLLLDEPTNDLDTQTLTVLEDYLEDFPGVVLTVSHDRYFLDKVVDELFIFTGEGEVREFLGSYTDYLEMEKTRELIEKAE
VQKEKKVVEEAPKQQRKRKLSYNEQREWETIEDTIAELEEKLESIGEELANVGSDFTKAQELSEAQQKTEEELEKTMERW
SELSDIVEGLK
>Mature_410_residues
TNRIFELDNGKLYSYEGNYSTFLEAKALREEQELAQESKRQNLYRRELAWIRRGAKARSTKQKARIQRFEELKGQEGPAA
KQSVDIALSGSRLGKKVLELKDVTKKFGDKTVLNNFNHIVKPGDRIGIIGANGSGKSSLLNMLAGKISPDSGEIEVGQTV
KIAYYTQENEEMNLNQRMIEYIKEIAEVIHTTDGKVIGASQMLERFLFPPHSHGTPLGKLSGGERRRLYLLRILMGEPNV
LLLDEPTNDLDTQTLTVLEDYLEDFPGVVLTVSHDRYFLDKVVDELFIFTGEGEVREFLGSYTDYLEMEKTRELIEKAEV
QKEKKVVEEAPKQQRKRKLSYNEQREWETIEDTIAELEEKLESIGEELANVGSDFTKAQELSEAQQKTEEELEKTMERWS
ELSDIVEGLK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=313, Percent_Identity=29.3929712460064, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI10947135, Length=334, Percent_Identity=28.4431137724551, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI69354671, Length=334, Percent_Identity=28.4431137724551, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI27881506, Length=335, Percent_Identity=25.3731343283582, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI10947137, Length=335, Percent_Identity=25.3731343283582, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI27262624, Length=363, Percent_Identity=23.9669421487603, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI27262626, Length=363, Percent_Identity=23.9669421487603, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI2367384, Length=313, Percent_Identity=41.5335463258786, Blast_Score=234, Evalue=1e-62,
Organism=Escherichia coli, GI1787182, Length=425, Percent_Identity=35.0588235294118, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI1789751, Length=388, Percent_Identity=29.639175257732, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI1787041, Length=312, Percent_Identity=30.4487179487179, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI1788165, Length=197, Percent_Identity=28.9340101522843, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787164, Length=249, Percent_Identity=26.5060240963855, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788225, Length=249, Percent_Identity=27.710843373494, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87081782, Length=177, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1786703, Length=205, Percent_Identity=28.780487804878, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1790467, Length=264, Percent_Identity=24.6212121212121, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87081834, Length=206, Percent_Identity=26.2135922330097, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87081791, Length=200, Percent_Identity=27.5, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788506, Length=222, Percent_Identity=28.3783783783784, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787758, Length=214, Percent_Identity=26.1682242990654, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=328, Percent_Identity=27.7439024390244, Blast_Score=134, Evalue=6e-32,
Organism=Caenorhabditis elegans, GI17555318, Length=346, Percent_Identity=25.7225433526012, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17553372, Length=297, Percent_Identity=26.9360269360269, Blast_Score=88, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI193202349, Length=290, Percent_Identity=25.8620689655172, Blast_Score=72, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6321121, Length=310, Percent_Identity=29.3548387096774, Blast_Score=121, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6320874, Length=315, Percent_Identity=26.984126984127, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6323278, Length=205, Percent_Identity=29.2682926829268, Blast_Score=87, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6324314, Length=211, Percent_Identity=29.8578199052133, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6325030, Length=192, Percent_Identity=32.8125, Blast_Score=83, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6324498, Length=219, Percent_Identity=28.7671232876712, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24641342, Length=323, Percent_Identity=26.9349845201238, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24642252, Length=319, Percent_Identity=27.2727272727273, Blast_Score=115, Evalue=7e-26,
Organism=Drosophila melanogaster, GI18859989, Length=319, Percent_Identity=27.2727272727273, Blast_Score=115, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24666836, Length=316, Percent_Identity=28.4810126582279, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI28574259, Length=222, Percent_Identity=30.6306306306306, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI161077321, Length=254, Percent_Identity=25.9842519685039, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24659289, Length=177, Percent_Identity=29.9435028248588, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 47037; Mature: 46906

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRIFELDNGKLYSYEGNYSTFLEAKALREEQELAQESKRQNLYRRELAWIRRGAKARS
CCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TKQKARIQRFEELKGQEGPAAKQSVDIALSGSRLGKKVLELKDVTKKFGDKTVLNNFNHI
HHHHHHHHHHHHHCCCCCCCCHHCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCHHH
VKPGDRIGIIGANGSGKSSLLNMLAGKISPDSGEIEVGQTVKIAYYTQENEEMNLNQRMI
CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEECCEEEEEEEECCCCCCCHHHHHH
EYIKEIAEVIHTTDGKVIGASQMLERFLFPPHSHGTPLGKLSGGERRRLYLLRILMGEPN
HHHHHHHHHHHCCCCCEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
VLLLDEPTNDLDTQTLTVLEDYLEDFPGVVLTVSHDRYFLDKVVDELFIFTGEGEVREFL
EEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHEEECCCHHHHHHH
GSYTDYLEMEKTRELIEKAEVQKEKKVVEEAPKQQRKRKLSYNEQREWETIEDTIAELEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KLESIGEELANVGSDFTKAQELSEAQQKTEEELEKTMERWSELSDIVEGLK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNRIFELDNGKLYSYEGNYSTFLEAKALREEQELAQESKRQNLYRRELAWIRRGAKARS
CCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TKQKARIQRFEELKGQEGPAAKQSVDIALSGSRLGKKVLELKDVTKKFGDKTVLNNFNHI
HHHHHHHHHHHHHCCCCCCCCHHCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCHHH
VKPGDRIGIIGANGSGKSSLLNMLAGKISPDSGEIEVGQTVKIAYYTQENEEMNLNQRMI
CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEECCEEEEEEEECCCCCCCHHHHHH
EYIKEIAEVIHTTDGKVIGASQMLERFLFPPHSHGTPLGKLSGGERRRLYLLRILMGEPN
HHHHHHHHHHHCCCCCEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
VLLLDEPTNDLDTQTLTVLEDYLEDFPGVVLTVSHDRYFLDKVVDELFIFTGEGEVREFL
EEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHEEECCCHHHHHHH
GSYTDYLEMEKTRELIEKAEVQKEKKVVEEAPKQQRKRKLSYNEQREWETIEDTIAELEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KLESIGEELANVGSDFTKAQELSEAQQKTEEELEKTMERWSELSDIVEGLK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]