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The map label for this gene is yvdG

Identifier: 222095646

GI number: 222095646

Start: 1964333

End: 1965874

Strand: Direct

Name: yvdG

Synonym: BCQ_1985

Alternate gene names: NA

Gene position: 1964333-1965874 (Clockwise)

Preceding gene: 222095642

Following gene: 222095647

Centisome position: 37.67

GC content: 35.21

Gene sequence:

>1542_bases
GTGGAATCTCATATACTTCATTGGACAAATGAATCCCTCCTTCTTAGAATTTTTATCTATTTTATAAAGATTTTAGTGGG
ATATTCAGTAAAAAGCAAGATATCTAAAAAACAGAACAAGATGTTTATTGTGAAAGCGTTATCTATTTTGTATTCTTTAA
TTATGAAAGGAAGATTAGGAGATGGGGGTAAGATAAAGATGAAAAAAAAGTTATTGTTGTCTGGAATGACAGCTTTGTTA
TCTTTTAGTTTAATAGCTTGCCAAAGTAATACTACAAAAGTTGATAACGCTAAGGATGGTAAAGGCTCCAGTGAAAAACA
AACCCTTCATGTGGCAACACTTGAATCAGCTTATGGTAAAGAGATGTGGAACAAAGTGATTGACGCATATGAAGCTGCTA
ATCCTAAAGTTGATGTTAAATTGACAGTGGACAAAAATCTTGAGGATGTCATAGGATCAAATATGAAAGCAGGAAAGTAT
CCGGATGTTGTGTTGTTGGCAACTGGGAGAAAACAGGCGCTAACAGAAACTTTGATTAAAGATAAAGCATTAGAAGACAT
TACTGATGTTTTTGATAAAAATGTTTATGGTGAAGATGTTAAAGTCAAAGATAAGTTAGTACCAGGGCTTACTGGTACAC
CTGCAACTAATCCTTATAATGACGGTAAAATTTATATGGCACCGATGTTCTATAGTCCAACTGGATTATTTTATAATGCT
AGTTTATTAAAAGAAAAAGGTTGGGAAGTGCCGAAGACTTGGGACGAAATGTGGGCTTTAGGAGATAAAGCGAAAGCAGA
AGGGATTTCATTATTTACTTATCCTACTACAGGCTACTTTGATACATTCTTCTATTCTTTACTACTAGGGGTGGGCGGGC
CTGAGTTATTTAATAAAGCTATGAAATATACAGATGGTGTTTGGGAAACTTCTGAAGCAACAAAATCTTTTGAAATTATC
GGAAAATTAGGAAAATATACAGAGCCAACTACTGTTGCGAATGCAAATGATAAAGACTACAAGAAAAATCAACAGTTGAT
TCTCGATAACAAAGCTTTGTTTATGCCAAATGGTACGTGGGTAGTTGGTGAAATGAAAGAAGCTCCTCGATCTAAAGGGT
TTGAATGGGGCATGATGGCTTTACCAACACTTGATGCTAATAGCGACCGTTATGCATTTACTTTCTTTGAACAAATGTGG
ATTCCATCGGCAGCTAAAAATAAACAACTTGCTAAAGACTTCATGACGTTTGTTTATTCGGATAAGGCAGCTGAAATTTT
TGCTGAGTCGAGTGCGATCCAGCCTATTAAAGGACTTTCTAATAAACTGACAGGTGAAAATAAATCATTCTATAGTATCT
ATGATAATGGAGTGAAAGTGGGAATAGGTGGATTTGCTGCAACGAAAGCTGTTGAAGGTGTAAGTATGCCAGATACATTA
TTTAGAACGATTGACAGTGTTGTTTCTGGTGATAAAAAGGTGAAAGATTGGCAAAGCTCTGTTGAAAAAGTGAGTGACCA
ATTACGGTCTGCATTAAAATAA

Upstream 100 bases:

>100_bases
TCTGTAAAGTGATGAGCATGAATGGTACTATGCCAATCTTTATCGTATTTTGATTTTGTAATATAAAGAAGTTTTACTGG
AAGATGGTTTCGTTGAAATT

Downstream 100 bases:

>100_bases
ATTCGTTTTCACTATGTACAATGGTGAGTCGCCTAGTCTCACCGTTGTACTTATTAATTGAGGTGATGGCATGAATAAGA
CGACAGAAAAAAGAATTTTT

Product: yvdg

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MESHILHWTNESLLLRIFIYFIKILVGYSVKSKISKKQNKMFIVKALSILYSLIMKGRLGDGGKIKMKKKLLLSGMTALL
SFSLIACQSNTTKVDNAKDGKGSSEKQTLHVATLESAYGKEMWNKVIDAYEAANPKVDVKLTVDKNLEDVIGSNMKAGKY
PDVVLLATGRKQALTETLIKDKALEDITDVFDKNVYGEDVKVKDKLVPGLTGTPATNPYNDGKIYMAPMFYSPTGLFYNA
SLLKEKGWEVPKTWDEMWALGDKAKAEGISLFTYPTTGYFDTFFYSLLLGVGGPELFNKAMKYTDGVWETSEATKSFEII
GKLGKYTEPTTVANANDKDYKKNQQLILDNKALFMPNGTWVVGEMKEAPRSKGFEWGMMALPTLDANSDRYAFTFFEQMW
IPSAAKNKQLAKDFMTFVYSDKAAEIFAESSAIQPIKGLSNKLTGENKSFYSIYDNGVKVGIGGFAATKAVEGVSMPDTL
FRTIDSVVSGDKKVKDWQSSVEKVSDQLRSALK

Sequences:

>Translated_513_residues
MESHILHWTNESLLLRIFIYFIKILVGYSVKSKISKKQNKMFIVKALSILYSLIMKGRLGDGGKIKMKKKLLLSGMTALL
SFSLIACQSNTTKVDNAKDGKGSSEKQTLHVATLESAYGKEMWNKVIDAYEAANPKVDVKLTVDKNLEDVIGSNMKAGKY
PDVVLLATGRKQALTETLIKDKALEDITDVFDKNVYGEDVKVKDKLVPGLTGTPATNPYNDGKIYMAPMFYSPTGLFYNA
SLLKEKGWEVPKTWDEMWALGDKAKAEGISLFTYPTTGYFDTFFYSLLLGVGGPELFNKAMKYTDGVWETSEATKSFEII
GKLGKYTEPTTVANANDKDYKKNQQLILDNKALFMPNGTWVVGEMKEAPRSKGFEWGMMALPTLDANSDRYAFTFFEQMW
IPSAAKNKQLAKDFMTFVYSDKAAEIFAESSAIQPIKGLSNKLTGENKSFYSIYDNGVKVGIGGFAATKAVEGVSMPDTL
FRTIDSVVSGDKKVKDWQSSVEKVSDQLRSALK
>Mature_513_residues
MESHILHWTNESLLLRIFIYFIKILVGYSVKSKISKKQNKMFIVKALSILYSLIMKGRLGDGGKIKMKKKLLLSGMTALL
SFSLIACQSNTTKVDNAKDGKGSSEKQTLHVATLESAYGKEMWNKVIDAYEAANPKVDVKLTVDKNLEDVIGSNMKAGKY
PDVVLLATGRKQALTETLIKDKALEDITDVFDKNVYGEDVKVKDKLVPGLTGTPATNPYNDGKIYMAPMFYSPTGLFYNA
SLLKEKGWEVPKTWDEMWALGDKAKAEGISLFTYPTTGYFDTFFYSLLLGVGGPELFNKAMKYTDGVWETSEATKSFEII
GKLGKYTEPTTVANANDKDYKKNQQLILDNKALFMPNGTWVVGEMKEAPRSKGFEWGMMALPTLDANSDRYAFTFFEQMW
IPSAAKNKQLAKDFMTFVYSDKAAEIFAESSAIQPIKGLSNKLTGENKSFYSIYDNGVKVGIGGFAATKAVEGVSMPDTL
FRTIDSVVSGDKKVKDWQSSVEKVSDQLRSALK

Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 57040; Mature: 57040

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESHILHWTNESLLLRIFIYFIKILVGYSVKSKISKKQNKMFIVKALSILYSLIMKGRLG
CCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
DGGKIKMKKKLLLSGMTALLSFSLIACQSNTTKVDNAKDGKGSSEKQTLHVATLESAYGK
CCCEEEHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHH
EMWNKVIDAYEAANPKVDVKLTVDKNLEDVIGSNMKAGKYPDVVLLATGRKQALTETLIK
HHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHH
DKALEDITDVFDKNVYGEDVKVKDKLVPGLTGTPATNPYNDGKIYMAPMFYSPTGLFYNA
HHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEH
SLLKEKGWEVPKTWDEMWALGDKAKAEGISLFTYPTTGYFDTFFYSLLLGVGGPELFNKA
HHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHH
MKYTDGVWETSEATKSFEIIGKLGKYTEPTTVANANDKDYKKNQQLILDNKALFMPNGTW
HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEEECCEEECCCCCE
VVGEMKEAPRSKGFEWGMMALPTLDANSDRYAFTFFEQMWIPSAAKNKQLAKDFMTFVYS
EEECHHHCCCCCCCCCCEEEECCCCCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHC
DKAAEIFAESSAIQPIKGLSNKLTGENKSFYSIYDNGVKVGIGGFAATKAVEGVSMPDTL
CHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCEEEECCCHHHHHHHCCCCCCHHH
FRTIDSVVSGDKKVKDWQSSVEKVSDQLRSALK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MESHILHWTNESLLLRIFIYFIKILVGYSVKSKISKKQNKMFIVKALSILYSLIMKGRLG
CCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
DGGKIKMKKKLLLSGMTALLSFSLIACQSNTTKVDNAKDGKGSSEKQTLHVATLESAYGK
CCCEEEHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHH
EMWNKVIDAYEAANPKVDVKLTVDKNLEDVIGSNMKAGKYPDVVLLATGRKQALTETLIK
HHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHH
DKALEDITDVFDKNVYGEDVKVKDKLVPGLTGTPATNPYNDGKIYMAPMFYSPTGLFYNA
HHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEH
SLLKEKGWEVPKTWDEMWALGDKAKAEGISLFTYPTTGYFDTFFYSLLLGVGGPELFNKA
HHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHH
MKYTDGVWETSEATKSFEIIGKLGKYTEPTTVANANDKDYKKNQQLILDNKALFMPNGTW
HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEEECCEEECCCCCE
VVGEMKEAPRSKGFEWGMMALPTLDANSDRYAFTFFEQMWIPSAAKNKQLAKDFMTFVYS
EEECHHHCCCCCCCCCCEEEECCCCCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHC
DKAAEIFAESSAIQPIKGLSNKLTGENKSFYSIYDNGVKVGIGGFAATKAVEGVSMPDTL
CHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCEEEECCCHHHHHHHCCCCCCHHH
FRTIDSVVSGDKKVKDWQSSVEKVSDQLRSALK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]