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The map label for this gene is yxkF [H]

Identifier: 222095644

GI number: 222095644

Start: 1962568

End: 1963431

Strand: Reverse

Name: yxkF [H]

Synonym: BCQ_1984

Alternate gene names: 222095644

Gene position: 1963431-1962568 (Counterclockwise)

Preceding gene: 222095645

Following gene: 222095643

Centisome position: 37.66

GC content: 30.79

Gene sequence:

>864_bases
ATGATTCAACAATTAAAAACATATTATGGTGAGGATATAAAAATCAATGCAGCTGTGTTGTCAGAAGATTATAGCTGGTT
TTTAGTTGAAGGAAATAAAGTCGGGATTCGAAAAATTCGATTACATCAAAAGGAACATCAATTGCTTTCATCCATCTTAA
CACCCATTCATGCTGATACATTTTATAAAACGGAAAAAGAAAAATCATGGTACGAAGCATTATACAGAAATAACAATATC
CCTATACGATCAGTTCGTTTTTTACACTTCTTCACAACACAATCTATTGTAGAAAGAGAAGAATTTCAAGATGCTTTACA
GTCTATGTTTTCTTTTACTACTACAATGTTATGGGAAACTTCGCAAGCCGGTGTCCTCATCTTAGAAGAAAACATAACGG
AATCTGTATTGCAAACAGCCTTAGATACACTAGAAACAGATTTTTTTATATCCCTATCCTTCTTTGTTGGAAGACGTTAT
TCGCAAACAACTGAATTTACTTACCTGTATCAATGGGAACGAACATTATTTTCTGTTCTTTCTCCCTATTTATCAAAAAA
AATTACATACATTGAACAACTTCTCCCTTATCAATTAATGATTTCATTACCAAAAGAAGAAAGAAAAAAATACACGAATC
AATTATTAGAAAATATTTCAAACGATAAAGAACTAATAGATAGCGTTAAAGTATTCTTCCAGTGTAACTTAAATGTCTCT
CTTGCAGCTAAACAATTATATTTACATCGTAATACTTTGCAGTATCGAATTGATAAATTCATTGAAAAAACAGGGATTAA
TATAAAAACCTTTGAAGGTGCAGTAGCAGTTTATATGGCGTTTCTTTCTTTAGATATCTCGTGA

Upstream 100 bases:

>100_bases
AAAACAAACTAGATTCTAGTGCAAAAATTTAAAGATAAATGCAATGAATCTATACTTCTTTAATATATTGTTACTACTAT
TTTGGAAAGAGAGTGTTCCT

Downstream 100 bases:

>100_bases
AAGACGATACAATATTCATTTCTCTTATATCATCATCGTTTTATAGTCTCTTGTGTGACTGGGAAACTCTATAAACTTAT
TTTTCTACGAGAAAAGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIQQLKTYYGEDIKINAAVLSEDYSWFLVEGNKVGIRKIRLHQKEHQLLSSILTPIHADTFYKTEKEKSWYEALYRNNNI
PIRSVRFLHFFTTQSIVEREEFQDALQSMFSFTTTMLWETSQAGVLILEENITESVLQTALDTLETDFFISLSFFVGRRY
SQTTEFTYLYQWERTLFSVLSPYLSKKITYIEQLLPYQLMISLPKEERKKYTNQLLENISNDKELIDSVKVFFQCNLNVS
LAAKQLYLHRNTLQYRIDKFIEKTGINIKTFEGAVAVYMAFLSLDIS

Sequences:

>Translated_287_residues
MIQQLKTYYGEDIKINAAVLSEDYSWFLVEGNKVGIRKIRLHQKEHQLLSSILTPIHADTFYKTEKEKSWYEALYRNNNI
PIRSVRFLHFFTTQSIVEREEFQDALQSMFSFTTTMLWETSQAGVLILEENITESVLQTALDTLETDFFISLSFFVGRRY
SQTTEFTYLYQWERTLFSVLSPYLSKKITYIEQLLPYQLMISLPKEERKKYTNQLLENISNDKELIDSVKVFFQCNLNVS
LAAKQLYLHRNTLQYRIDKFIEKTGINIKTFEGAVAVYMAFLSLDIS
>Mature_287_residues
MIQQLKTYYGEDIKINAAVLSEDYSWFLVEGNKVGIRKIRLHQKEHQLLSSILTPIHADTFYKTEKEKSWYEALYRNNNI
PIRSVRFLHFFTTQSIVEREEFQDALQSMFSFTTTMLWETSQAGVLILEENITESVLQTALDTLETDFFISLSFFVGRRY
SQTTEFTYLYQWERTLFSVLSPYLSKKITYIEQLLPYQLMISLPKEERKKYTNQLLENISNDKELIDSVKVFFQCNLNVS
LAAKQLYLHRNTLQYRIDKFIEKTGINIKTFEGAVAVYMAFLSLDIS

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33853; Mature: 33853

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQQLKTYYGEDIKINAAVLSEDYSWFLVEGNKVGIRKIRLHQKEHQLLSSILTPIHADT
CCCHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHH
FYKTEKEKSWYEALYRNNNIPIRSVRFLHFFTTQSIVEREEFQDALQSMFSFTTTMLWET
HHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
SQAGVLILEENITESVLQTALDTLETDFFISLSFFVGRRYSQTTEFTYLYQWERTLFSVL
CCCCEEEEECCHHHHHHHHHHHHHCHHHHEEHHHHHCCCCCCCCCEEEEHHHHHHHHHHH
SPYLSKKITYIEQLLPYQLMISLPKEERKKYTNQLLENISNDKELIDSVKVFFQCNLNVS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCHH
LAAKQLYLHRNTLQYRIDKFIEKTGINIKTFEGAVAVYMAFLSLDIS
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQQLKTYYGEDIKINAAVLSEDYSWFLVEGNKVGIRKIRLHQKEHQLLSSILTPIHADT
CCCHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHH
FYKTEKEKSWYEALYRNNNIPIRSVRFLHFFTTQSIVEREEFQDALQSMFSFTTTMLWET
HHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
SQAGVLILEENITESVLQTALDTLETDFFISLSFFVGRRYSQTTEFTYLYQWERTLFSVL
CCCCEEEEECCHHHHHHHHHHHHHCHHHHEEHHHHHCCCCCCCCCEEEEHHHHHHHHHHH
SPYLSKKITYIEQLLPYQLMISLPKEERKKYTNQLLENISNDKELIDSVKVFFQCNLNVS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCHH
LAAKQLYLHRNTLQYRIDKFIEKTGINIKTFEGAVAVYMAFLSLDIS
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]