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The map label for this gene is yxdM [H]

Identifier: 222095640

GI number: 222095640

Start: 1957480

End: 1959360

Strand: Direct

Name: yxdM [H]

Synonym: BCQ_1980

Alternate gene names: 222095640

Gene position: 1957480-1959360 (Clockwise)

Preceding gene: 222095638

Following gene: 222095641

Centisome position: 37.54

GC content: 33.44

Gene sequence:

>1881_bases
ATGAATATTAGAGAACTCGCATATCGGAATGTGACGCGAAATAGACGAACATATTCAGCATATTTTTTAAGTAGTGCATT
TGCTATTATGGCCTTTTTTGTTTATTCGTTTTTTGCGTTTCATCCGGCATTAAGTGCTGGAGAATTGGGACGATATGTGT
TCGTAAGTATGTCTTTTGCACAGTCCATTATTTACTTATTTACATTTTTCTTTATTTTATATTCGATGGGAATGTTTTTA
AAAACGAGAAAGCGTGAACTAGGAATTTTAATGATGTTAGGTATGACGAAATATCAATTAAAGCGTCTTATCTTTTTTGA
AAATATTATGATTGGGATAGGAGCAATTATTTTTGGAATTCTAGCAGGAATGTTATTTTCTGGAGTATTACTATTTGTAG
CTCCCATGATATTAAAGTTAGATATTTCCTTACCTTATTACATTCCAATGAAAGCCATTGTTGTAACGAGTATTATGTTT
TTTGTATTATTTATGATCATTTCATTGTTTAGTGCAGGAATGATTCGAAAAAATAAAATTATGAAATTGTTTAGAGGATC
GGCAGAAGCGAAGCCGGAACCGAAAGCATCCATTATTTCTTCTATATTAGCAGTTATATTGCTTAGTGCGGGATATGCAG
GAGCACTTATGTCACACGGTGCAATGGTATTTATCATGATGATTCCTGTTACAACGGTAGTCATTATTGGTACGTATTTG
CTGTATAAGCAGTTGAGTGTCTTTATTATTAGACTATGTAAAAAAAGTAAACGTTTCTATTGGACACAGACAAATATTAT
TACGTTGTCAGATTTAGCTTACCGTATGAGAGATAACGCAAGAATGTTCTTTATTGTAACCATCATTTCAACTGTAGCAT
TTTCAGCAATAGGTACATTAGTTGGCTTTACATCAATGACAAAGGCGATTATGGAGAGACCAATTGCGTTTCACTATCAT
TCTAAGCAAGGAAATAGTAATGAATCACAGCATTTGAAGATGATTGACGAAGGGTTAAAGAAACATAGTATAGCAGCTTC
AAAAACTAATATTTCAACGAAGAAAACGGAGGAGCAGTCGTTAAGAAGCGCCGCGTTTATAAAGGAATCAGACTATAAGG
AATATGCGAAGTTAACAGGAGAACCCTTTCATGCGGTATCAAAAAAAGAAGTTTTATTTTTGGCAGTTGATATACCAGGA
CCACCGATGAAAGAAAGAAAAGAAATTACGTTGCCACATTTGAATGAACCTTTAAAAGTGAAAAAAATTAATACGTCTTC
ATTAAGTAAAATAATAAGAGGTAACGTTTATGTAATCTCTAACAAGCAGTATGATGCATTACAAGATGGATTTAAAGAGG
AAAAAAATTATGTATACAAAACAGAGGGAACGAAAGATGAAATTGAGGTTGGTAAAGAACTAACGCATCAGATGAAGCCT
TATGAAGAACATGCAACGTTTAGTGCAGAAGAGTACGAACAAAACCAAAGTTTACAAATTGCAGGACCAATTCTATTTGT
AGGTTTCTTTATCGGTATTGTATTTTTCGTATGTGCAGGAAGCTTCCTTTATTTCCGTTTGTTTTCTGACTTGGAGGATG
ATACTCGTTTGTTTGAAATGATTCGAAAAGTAGGCTTAACGAGCGGAGAATTATCGAAAGTAGTTACAATCCGATTGGGA
CTTTTATTCTTTGTTCCAATATGTGTTGCAACATTACACGGAGCAGTAGCGTTAACTGCACTCGGACAGATGTTTGAGTA
CTCACTATTTAAAGAAAATGCGATTGTATTAAGTATTTTCATAGGAATTCAAGTTGTATACTTCTTACTGATTCGATCTC
GTTATTTAAAACAATTGAAAGAGAGATTACGTATTCGTTAA

Upstream 100 bases:

>100_bases
CCTTTCAATAATGTAAGGTTTTTGTCATTTGAATCGATGGAAGGGATTTCCGTACTTTACTAATATAAGAACATAGTTAG
TAGAAGGGCGGAGAAGTAAT

Downstream 100 bases:

>100_bases
ATGTGTTTTTTTAACTTGAGTACAAAATTTTCTAAAAAGAGGCAGGTATTACCAAAAAGTGATAAAATGGAAAAAGCGAG
GTGAAAAAATTAATAAATAG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MNIRELAYRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFAQSIIYLFTFFFILYSMGMFL
KTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGILAGMLFSGVLLFVAPMILKLDISLPYYIPMKAIVVTSIMF
FVLFMIISLFSAGMIRKNKIMKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTLVGFTSMTKAIMERPIAFHYH
SKQGNSNESQHLKMIDEGLKKHSIAASKTNISTKKTEEQSLRSAAFIKESDYKEYAKLTGEPFHAVSKKEVLFLAVDIPG
PPMKERKEITLPHLNEPLKVKKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKP
YEEHATFSAEEYEQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEMIRKVGLTSGELSKVVTIRLG
LLFFVPICVATLHGAVALTALGQMFEYSLFKENAIVLSIFIGIQVVYFLLIRSRYLKQLKERLRIR

Sequences:

>Translated_626_residues
MNIRELAYRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFAQSIIYLFTFFFILYSMGMFL
KTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGILAGMLFSGVLLFVAPMILKLDISLPYYIPMKAIVVTSIMF
FVLFMIISLFSAGMIRKNKIMKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTLVGFTSMTKAIMERPIAFHYH
SKQGNSNESQHLKMIDEGLKKHSIAASKTNISTKKTEEQSLRSAAFIKESDYKEYAKLTGEPFHAVSKKEVLFLAVDIPG
PPMKERKEITLPHLNEPLKVKKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKP
YEEHATFSAEEYEQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEMIRKVGLTSGELSKVVTIRLG
LLFFVPICVATLHGAVALTALGQMFEYSLFKENAIVLSIFIGIQVVYFLLIRSRYLKQLKERLRIR
>Mature_626_residues
MNIRELAYRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFAQSIIYLFTFFFILYSMGMFL
KTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGILAGMLFSGVLLFVAPMILKLDISLPYYIPMKAIVVTSIMF
FVLFMIISLFSAGMIRKNKIMKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTLVGFTSMTKAIMERPIAFHYH
SKQGNSNESQHLKMIDEGLKKHSIAASKTNISTKKTEEQSLRSAAFIKESDYKEYAKLTGEPFHAVSKKEVLFLAVDIPG
PPMKERKEITLPHLNEPLKVKKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKP
YEEHATFSAEEYEQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEMIRKVGLTSGELSKVVTIRLG
LLFFVPICVATLHGAVALTALGQMFEYSLFKENAIVLSIFIGIQVVYFLLIRSRYLKQLKERLRIR

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 71249; Mature: 71249

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRELAYRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHHHH
QSIIYLFTFFFILYSMGMFLKTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMLFSGVLLFVAPMILKLDISLPYYIPMKAIVVTSIMFFVLFMIISLFSAGMIRKNKI
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTL
HHHHHHHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
VGFTSMTKAIMERPIAFHYHSKQGNSNESQHLKMIDEGLKKHSIAASKTNISTKKTEEQS
HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH
LRSAAFIKESDYKEYAKLTGEPFHAVSKKEVLFLAVDIPGPPMKERKEITLPHLNEPLKV
HHHHHHHHHCCHHHHHHHCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
KKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKP
EECCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCC
YEEHATFSAEEYEQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEM
CHHHCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IRKVGLTSGELSKVVTIRLGLLFFVPICVATLHGAVALTALGQMFEYSLFKENAIVLSIF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IGIQVVYFLLIRSRYLKQLKERLRIR
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIRELAYRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHHHH
QSIIYLFTFFFILYSMGMFLKTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMLFSGVLLFVAPMILKLDISLPYYIPMKAIVVTSIMFFVLFMIISLFSAGMIRKNKI
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTL
HHHHHHHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
VGFTSMTKAIMERPIAFHYHSKQGNSNESQHLKMIDEGLKKHSIAASKTNISTKKTEEQS
HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH
LRSAAFIKESDYKEYAKLTGEPFHAVSKKEVLFLAVDIPGPPMKERKEITLPHLNEPLKV
HHHHHHHHHCCHHHHHHHCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
KKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKP
EECCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCC
YEEHATFSAEEYEQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEM
CHHHCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IRKVGLTSGELSKVVTIRLGLLFFVPICVATLHGAVALTALGQMFEYSLFKENAIVLSIF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IGIQVVYFLLIRSRYLKQLKERLRIR
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]