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The map label for this gene is lytB [H]

Identifier: 222095486

GI number: 222095486

Start: 1797309

End: 1798667

Strand: Direct

Name: lytB [H]

Synonym: BCQ_1826

Alternate gene names: 222095486

Gene position: 1797309-1798667 (Clockwise)

Preceding gene: 222095485

Following gene: 222095487

Centisome position: 34.47

GC content: 34.88

Gene sequence:

>1359_bases
ATGGCTCCAGCAACTTCGTTTGCATCTACAAAAGAATTTCCAGATGTTCCAAAAAATCATTGGGCACTTGAAGCAATTAA
TGATTTAACGTCAAAAGGGATTATTGCAGGTTACGATAATGGTAAATTCGGCTTCGGAGATGTTGTAACTCGTGAGCAAG
TAGCAGCATTAATGTATCGCGCATTAAAACCAGAAGCAAAAAGTGATTATAAAAATCCATACTCTGATATTAGTGCAGGA
ACGACAATGTTCCCAAAGGAAATTTTAGCATTAACAGATATGGGGATTTTCGTAGGTGATGATAAAGGAACGTTTAGACC
GAAAGAATCATTAACACGTGCGGAGATGTCTGTTATTTTGCAAAAAGCATTTAAATTAGAAGTAAAAGCACCACATACAT
TTGATGATATAGATGCAACATATTGGTGGGCAAAGGAAGCAATTAGTGCATTGCAATCTAATGGTGTAGCGGCAGGGAAT
GGACTTGGAGGATTTGATCCATCAGGTGTATTAACACGTGAAAGCTATGCACAACTTTTATATAAAGCGATGCAAATAAA
AAAGGATGTTCCTGTTGAACAACCATCATATATTAATCTAGATGTGACATTACCATCTAACGTAACAGCGCAAGAGATTG
ATAATTTTATTAAAAAATCCCATCCAGATAGCCCACTTGTTGGGAATGGTAAAGATTTTATTCAAGCGCAAAACGAGTAT
GGTGTGAGCGCATTATACTTAGCTGCACATGCAATTTTAGAATCTGGTTACGGTAAATCAGAAATTGCATATCGTAAACA
TAATTTATTTGGCTTAAAAGCATTTGATTGGGAGCCATTTGCCAATGCGAAATACTTACCATCTTACGCGCAAAGTATTT
CATACAATGCTGATTATGTACGAAAGAATTATTTAGAAGAAGGTGCTGATCATTTCCATGGCTACACATTACCTGCTATG
AATGAAAAGTATGCAACAGATAAAGAATGGGCTGGCAAAATCGCTAATATTATGGAACGTATTAAACCGTTTAACAAGAA
AGACTATGAAAATGTAAAACGATTACCAAAAAACCCTAATACATTAAATGTAAATGCATTAGGCGAAGCGATTCCATATA
AAGATTATGCAAAAGATGCAACAGCTACTGTTCAATTAGTAGGCTCTTACTATCAAGTACCATATCCATTTAGCTATACA
ATTAAGAGCGTACCAAATATTACGCAAAATGAAGTTGGAAAATTAGAAAGTGGCAAGAAAGTAAATGTATATCGTGAAGA
TCCAAACGGCTGGGTAGAATTTTCATTTGAAAATGCTCAAGAAAAATATTGGACATTGAAGAAGAACTTAAAAATATAA

Upstream 100 bases:

>100_bases
GCAAGTTAACACGGGACAAGCATATAAAAAACGTGTTAAAAAATTTATGAAAAAAGTTATTTCTAATGTGTTAGCAGTGA
CAGTCGCGCTTCAAGTAGTG

Downstream 100 bases:

>100_bases
ATAAAAAAGGTGTTTTCACTTATGAAAACACCTTTTTTATTTATATTTAACATGTAATATTCTTAGATTCAGTATGAGTT
TCTTTTTTATGTTTTTACCA

Product: s-layer protein, four slh domains

Products: NA

Alternate protein names: Murein hydrolase [H]

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MAPATSFASTKEFPDVPKNHWALEAINDLTSKGIIAGYDNGKFGFGDVVTREQVAALMYRALKPEAKSDYKNPYSDISAG
TTMFPKEILALTDMGIFVGDDKGTFRPKESLTRAEMSVILQKAFKLEVKAPHTFDDIDATYWWAKEAISALQSNGVAAGN
GLGGFDPSGVLTRESYAQLLYKAMQIKKDVPVEQPSYINLDVTLPSNVTAQEIDNFIKKSHPDSPLVGNGKDFIQAQNEY
GVSALYLAAHAILESGYGKSEIAYRKHNLFGLKAFDWEPFANAKYLPSYAQSISYNADYVRKNYLEEGADHFHGYTLPAM
NEKYATDKEWAGKIANIMERIKPFNKKDYENVKRLPKNPNTLNVNALGEAIPYKDYAKDATATVQLVGSYYQVPYPFSYT
IKSVPNITQNEVGKLESGKKVNVYREDPNGWVEFSFENAQEKYWTLKKNLKI

Sequences:

>Translated_452_residues
MAPATSFASTKEFPDVPKNHWALEAINDLTSKGIIAGYDNGKFGFGDVVTREQVAALMYRALKPEAKSDYKNPYSDISAG
TTMFPKEILALTDMGIFVGDDKGTFRPKESLTRAEMSVILQKAFKLEVKAPHTFDDIDATYWWAKEAISALQSNGVAAGN
GLGGFDPSGVLTRESYAQLLYKAMQIKKDVPVEQPSYINLDVTLPSNVTAQEIDNFIKKSHPDSPLVGNGKDFIQAQNEY
GVSALYLAAHAILESGYGKSEIAYRKHNLFGLKAFDWEPFANAKYLPSYAQSISYNADYVRKNYLEEGADHFHGYTLPAM
NEKYATDKEWAGKIANIMERIKPFNKKDYENVKRLPKNPNTLNVNALGEAIPYKDYAKDATATVQLVGSYYQVPYPFSYT
IKSVPNITQNEVGKLESGKKVNVYREDPNGWVEFSFENAQEKYWTLKKNLKI
>Mature_451_residues
APATSFASTKEFPDVPKNHWALEAINDLTSKGIIAGYDNGKFGFGDVVTREQVAALMYRALKPEAKSDYKNPYSDISAGT
TMFPKEILALTDMGIFVGDDKGTFRPKESLTRAEMSVILQKAFKLEVKAPHTFDDIDATYWWAKEAISALQSNGVAAGNG
LGGFDPSGVLTRESYAQLLYKAMQIKKDVPVEQPSYINLDVTLPSNVTAQEIDNFIKKSHPDSPLVGNGKDFIQAQNEYG
VSALYLAAHAILESGYGKSEIAYRKHNLFGLKAFDWEPFANAKYLPSYAQSISYNADYVRKNYLEEGADHFHGYTLPAMN
EKYATDKEWAGKIANIMERIKPFNKKDYENVKRLPKNPNTLNVNALGEAIPYKDYAKDATATVQLVGSYYQVPYPFSYTI
KSVPNITQNEVGKLESGKKVNVYREDPNGWVEFSFENAQEKYWTLKKNLKI

Specific function: Plays an important role in cell wall degradation and cell separation [H]

COG id: COG4193

COG function: function code G; Beta- N-acetylglucosaminidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 cell wall-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018337
- InterPro:   IPR013338
- InterPro:   IPR002901 [H]

Pfam domain/function: PF01473 CW_binding_1; PF01832 Glucosaminidase [H]

EC number: =3.2.1.96 [H]

Molecular weight: Translated: 50598; Mature: 50467

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPATSFASTKEFPDVPKNHWALEAINDLTSKGIIAGYDNGKFGFGDVVTREQVAALMYR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHH
ALKPEAKSDYKNPYSDISAGTTMFPKEILALTDMGIFVGDDKGTFRPKESLTRAEMSVIL
HHCCCHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHH
QKAFKLEVKAPHTFDDIDATYWWAKEAISALQSNGVAAGNGLGGFDPSGVLTRESYAQLL
HHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
YKAMQIKKDVPVEQPSYINLDVTLPSNVTAQEIDNFIKKSHPDSPLVGNGKDFIQAQNEY
HHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCC
GVSALYLAAHAILESGYGKSEIAYRKHNLFGLKAFDWEPFANAKYLPSYAQSISYNADYV
CHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHCCCCHHHH
RKNYLEEGADHFHGYTLPAMNEKYATDKEWAGKIANIMERIKPFNKKDYENVKRLPKNPN
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC
TLNVNALGEAIPYKDYAKDATATVQLVGSYYQVPYPFSYTIKSVPNITQNEVGKLESGKK
EEEECCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHCCCCCCCE
VNVYREDPNGWVEFSFENAQEKYWTLKKNLKI
EEEEEECCCCEEEEEECCCHHHHHHHHHCCCC
>Mature Secondary Structure 
APATSFASTKEFPDVPKNHWALEAINDLTSKGIIAGYDNGKFGFGDVVTREQVAALMYR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHH
ALKPEAKSDYKNPYSDISAGTTMFPKEILALTDMGIFVGDDKGTFRPKESLTRAEMSVIL
HHCCCHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHH
QKAFKLEVKAPHTFDDIDATYWWAKEAISALQSNGVAAGNGLGGFDPSGVLTRESYAQLL
HHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
YKAMQIKKDVPVEQPSYINLDVTLPSNVTAQEIDNFIKKSHPDSPLVGNGKDFIQAQNEY
HHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCC
GVSALYLAAHAILESGYGKSEIAYRKHNLFGLKAFDWEPFANAKYLPSYAQSISYNADYV
CHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHCCCCHHHH
RKNYLEEGADHFHGYTLPAMNEKYATDKEWAGKIANIMERIKPFNKKDYENVKRLPKNPN
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC
TLNVNALGEAIPYKDYAKDATATVQLVGSYYQVPYPFSYTIKSVPNITQNEVGKLESGKK
EEEECCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHCCCCCCCE
VNVYREDPNGWVEFSFENAQEKYWTLKKNLKI
EEEEEECCCCEEEEEECCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]