Click here to switch to the map view.

The map label for this gene is ypjD [H]

Identifier: 222095261

GI number: 222095261

Start: 1569496

End: 1569837

Strand: Direct

Name: ypjD [H]

Synonym: BCQ_1601

Alternate gene names: 222095261

Gene position: 1569496-1569837 (Clockwise)

Preceding gene: 222095259

Following gene: 222095262

Centisome position: 30.1

GC content: 35.09

Gene sequence:

>342_bases
ATGGAAGCGAAAACGATGAAGGATATGCAGAAAGAAGTTGATGCATATATTGGTCAGTTTAAAGAAGGTTATTTCAGTCC
ACTTGCAATGATGGCTCGTTTAACGGAAGAAATGGGGGAGCTTGCAAGAGAGGTGAATCATTATTATGGTGAGAAACCGA
AGAAAACAACTGAAACAGAACGTAGTATTGAAGAAGAGCTTGGAGATGTATTATTTGTTATGATTTGTATGGCAAATAGT
TTAAATATTGATTTAGAAACAGCACATAACATTGTAATGAATAAATTTAATACTCGCGATAAAGATCGCTGGACACGTAT
TGATGAGGGAGAGAAAGAATAA

Upstream 100 bases:

>100_bases
TCCAAAAATGGGTCGCAAATAGGTGTTTGGCGGGGAATAATATTTGTCAAATCGCGATGAATTGGCTAACATGAAAGAGG
AAGGATTAGAGGTGAATTGT

Downstream 100 bases:

>100_bases
TGAAAGAAATTAAAGTAATTATCGCTGGACCAAGAGGACGTATGGGACATGAAGCAGTTCTTCTTATGGAAAGAACGGAA
CATTTTAATTTAGTAGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MEAKTMKDMQKEVDAYIGQFKEGYFSPLAMMARLTEEMGELAREVNHYYGEKPKKTTETERSIEEELGDVLFVMICMANS
LNIDLETAHNIVMNKFNTRDKDRWTRIDEGEKE

Sequences:

>Translated_113_residues
MEAKTMKDMQKEVDAYIGQFKEGYFSPLAMMARLTEEMGELAREVNHYYGEKPKKTTETERSIEEELGDVLFVMICMANS
LNIDLETAHNIVMNKFNTRDKDRWTRIDEGEKE
>Mature_113_residues
MEAKTMKDMQKEVDAYIGQFKEGYFSPLAMMARLTEEMGELAREVNHYYGEKPKKTTETERSIEEELGDVLFVMICMANS
LNIDLETAHNIVMNKFNTRDKDRWTRIDEGEKE

Specific function: Unknown

COG id: COG1694

COG function: function code R; Predicted pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012359
- InterPro:   IPR004518 [H]

Pfam domain/function: PF03819 MazG [H]

EC number: NA

Molecular weight: Translated: 13235; Mature: 13235

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAKTMKDMQKEVDAYIGQFKEGYFSPLAMMARLTEEMGELAREVNHYYGEKPKKTTETE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
RSIEEELGDVLFVMICMANSLNIDLETAHNIVMNKFNTRDKDRWTRIDEGEKE
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MEAKTMKDMQKEVDAYIGQFKEGYFSPLAMMARLTEEMGELAREVNHYYGEKPKKTTETE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
RSIEEELGDVLFVMICMANSLNIDLETAHNIVMNKFNTRDKDRWTRIDEGEKE
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]