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The map label for this gene is sirB [H]

Identifier: 222095160

GI number: 222095160

Start: 1472964

End: 1473719

Strand: Direct

Name: sirB [H]

Synonym: BCQ_1500

Alternate gene names: 222095160

Gene position: 1472964-1473719 (Clockwise)

Preceding gene: 222095159

Following gene: 222095161

Centisome position: 28.25

GC content: 35.85

Gene sequence:

>756_bases
ATGAAAGCCATCTTATATATATGTCATGGAAGTCGCTTGAAAGCAGCGAAAGAAGAAGCGGTTGCATTTATTACGTCATG
TATGAACCGTGTAGAGGCAAGTATTCAAGAAATTTGTTTTTTAGAGTTAGCGAGTCCAACTATTGATGAAGGGTTCCGTA
CATGTGTGAAGCGTGGTGCTACAGAGATTATTGTTATTCCCGTTTTTTTATTAGCGGCAGGTCATGTGAAAAAAGATATC
CCGTTTGAATTGGAAAAGTTAACTAATCAATTTTTGAATGTTAAAGTGACCTATGGTAATCCGTTTGGTGTATCAGAAAC
ACTTGTTAAATCGGTGTATAGCGGAAGTGGCATTGAACAGGAAGATAAGAATGAAGTGACGTTACTTCTCGTTGCAAGAG
GGAGCAGTGATCCTGAAGTACTAAAAGATATAAACTGGATCGCTTCTTTATTTCAAATGGAAGAGAAAATTAAAAAAGTA
GAAGTTTGTTATTTAGCAGCTGCCGAGCCGAAATTTGAGGAGAAGTTAAAGGAAGTTGTAGAACGAAAAGAAAAGAATAT
CGTTGTACTGCCTTACTTGTTATTTACAGGTTTGCTTATGAAGCATATTGAAAAAGAAGTACGCCAATATGAGCTAGATG
AGATAAAAATAAGTCCATATTTAGGGAAGAATGAAGCGTTTCAGTATATGTTAATTCAGAAAACGAAGAAATTATTGAAG
GGAGATCAATATGTATCCACTTACAGTGCGAGTTGA

Upstream 100 bases:

>100_bases
AGCATGATTGTAATTGGAGAAGTCGTCCGTTTTAGAGAAAAAATTCATTGGTTTGAGAAACAGACAGAAAGTACGTATCA
AGTAAGTGGAGTGTTATAAA

Downstream 100 bases:

>100_bases
GAAGAAACGTGTTGTTGTCATTGGTGGAGGGAAAGTCGCGGGATTCAAAATTATTCCTTTACTCAAACAAGGTGCAGATA
TAGTCGTGGTAAGTCCTGAA

Product: cbix domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKAILYICHGSRLKAAKEEAVAFITSCMNRVEASIQEICFLELASPTIDEGFRTCVKRGATEIIVIPVFLLAAGHVKKDI
PFELEKLTNQFLNVKVTYGNPFGVSETLVKSVYSGSGIEQEDKNEVTLLLVARGSSDPEVLKDINWIASLFQMEEKIKKV
EVCYLAAAEPKFEEKLKEVVERKEKNIVVLPYLLFTGLLMKHIEKEVRQYELDEIKISPYLGKNEAFQYMLIQKTKKLLK
GDQYVSTYSAS

Sequences:

>Translated_251_residues
MKAILYICHGSRLKAAKEEAVAFITSCMNRVEASIQEICFLELASPTIDEGFRTCVKRGATEIIVIPVFLLAAGHVKKDI
PFELEKLTNQFLNVKVTYGNPFGVSETLVKSVYSGSGIEQEDKNEVTLLLVARGSSDPEVLKDINWIASLFQMEEKIKKV
EVCYLAAAEPKFEEKLKEVVERKEKNIVVLPYLLFTGLLMKHIEKEVRQYELDEIKISPYLGKNEAFQYMLIQKTKKLLK
GDQYVSTYSAS
>Mature_251_residues
MKAILYICHGSRLKAAKEEAVAFITSCMNRVEASIQEICFLELASPTIDEGFRTCVKRGATEIIVIPVFLLAAGHVKKDI
PFELEKLTNQFLNVKVTYGNPFGVSETLVKSVYSGSGIEQEDKNEVTLLLVARGSSDPEVLKDINWIASLFQMEEKIKKV
EVCYLAAAEPKFEEKLKEVVERKEKNIVVLPYLLFTGLLMKHIEKEVRQYELDEIKISPYLGKNEAFQYMLIQKTKKLLK
GDQYVSTYSAS

Specific function: Chelates iron to the siroheme precursor [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. SirB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.4 [H]

Molecular weight: Translated: 28426; Mature: 28426

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAILYICHGSRLKAAKEEAVAFITSCMNRVEASIQEICFLELASPTIDEGFRTCVKRGA
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
TEIIVIPVFLLAAGHVKKDIPFELEKLTNQFLNVKVTYGNPFGVSETLVKSVYSGSGIEQ
CEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCCCCCCC
EDKNEVTLLLVARGSSDPEVLKDINWIASLFQMEEKIKKVEVCYLAAAEPKFEEKLKEVV
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH
ERKEKNIVVLPYLLFTGLLMKHIEKEVRQYELDEIKISPYLGKNEAFQYMLIQKTKKLLK
HHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHC
GDQYVSTYSAS
CCHHHHCCCCC
>Mature Secondary Structure
MKAILYICHGSRLKAAKEEAVAFITSCMNRVEASIQEICFLELASPTIDEGFRTCVKRGA
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
TEIIVIPVFLLAAGHVKKDIPFELEKLTNQFLNVKVTYGNPFGVSETLVKSVYSGSGIEQ
CEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCCCCCCC
EDKNEVTLLLVARGSSDPEVLKDINWIASLFQMEEKIKKVEVCYLAAAEPKFEEKLKEVV
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH
ERKEKNIVVLPYLLFTGLLMKHIEKEVRQYELDEIKISPYLGKNEAFQYMLIQKTKKLLK
HHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHC
GDQYVSTYSAS
CCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA