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The map label for this gene is queE [H]

Identifier: 222095075

GI number: 222095075

Start: 1404292

End: 1405008

Strand: Direct

Name: queE [H]

Synonym: BCQ_1415

Alternate gene names: 222095075

Gene position: 1404292-1405008 (Clockwise)

Preceding gene: 222095074

Following gene: 222095076

Centisome position: 26.93

GC content: 37.8

Gene sequence:

>717_bases
ATGAGTAAAATCCCTGTCTTAGAAATATTTGGTCCGACTATTCAAGGTGAAGGAATGGTTGTAGGACAAAAGACGATGTT
TATCCGTACAGCTGGCTGTGATTATAGCTGCGCTTGGTGTGATTCTGCTTTTACGTGGGATGGATCGGCTAAAGATCAAA
TTAGACAGATGACAGCAGAAGACGTTTGGAATGAGCTTGTAGAAATTGGCGGCGAAAATTTTTCTCATGTTACGATTTCA
GGTGGAAATCCGGTATTGTTGAAAAATATTGAGTTTCTTCTTTCTATATTAAAAGAGAATGGAATGCGAACGGCAATCGA
AACGCAAGGGAGCAAATGGCAAGATTGGTTACTTGAAATTGATGAAATAACGATTTCTCCGAAGCCGCCAAGCTCGACGA
TGAATACTGATTTTCAGAAGTTAGATGATGTAATTCAGAAGCTAGCAGGAAAAGATATTAGCTTAAAGGTAGTAGTATTT
GACGATTATGATTTTGAGTATGCAGTTAAGATGCACGAACGTTATCCAGAGGTACCATTTTTCTTACAAGTAGGAAATGA
TGATACAAAAACTGTGGATGATGCGATGTTGATTAAAAAGCTATTAGATAAGTATGAGTGGCTTATTGAAAAAGCGGTTA
ACTGCAAAGAAATGAATAATGCAAAAGTATTGCCGCAGCTTCATGCGTTAGTATGGGGAAATAAACGCGGAGTATAA

Upstream 100 bases:

>100_bases
GATAATCGTGTGAATGAATATAAAGGAGCTCGTGTTGAATTTGTTCGTCTATTTGAGACTCCGACTAGTTATGCAGAAGT
AAGACGGGAGTGGATGCTCG

Downstream 100 bases:

>100_bases
TGAGAAGGGATGTTTAAAATGGCAGGAAGATTAGATGAAGATTTAAAAGATGTAACATTATTAGGAAATCAAAATACAAA
ATATTTATTTGAATATAGCC

Product: radical sam domain protein

Products: NA

Alternate protein names: CDG synthase; Queuosine biosynthesis protein queE [H]

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSKIPVLEIFGPTIQGEGMVVGQKTMFIRTAGCDYSCAWCDSAFTWDGSAKDQIRQMTAEDVWNELVEIGGENFSHVTIS
GGNPVLLKNIEFLLSILKENGMRTAIETQGSKWQDWLLEIDEITISPKPPSSTMNTDFQKLDDVIQKLAGKDISLKVVVF
DDYDFEYAVKMHERYPEVPFFLQVGNDDTKTVDDAMLIKKLLDKYEWLIEKAVNCKEMNNAKVLPQLHALVWGNKRGV

Sequences:

>Translated_238_residues
MSKIPVLEIFGPTIQGEGMVVGQKTMFIRTAGCDYSCAWCDSAFTWDGSAKDQIRQMTAEDVWNELVEIGGENFSHVTIS
GGNPVLLKNIEFLLSILKENGMRTAIETQGSKWQDWLLEIDEITISPKPPSSTMNTDFQKLDDVIQKLAGKDISLKVVVF
DDYDFEYAVKMHERYPEVPFFLQVGNDDTKTVDDAMLIKKLLDKYEWLIEKAVNCKEMNNAKVLPQLHALVWGNKRGV
>Mature_237_residues
SKIPVLEIFGPTIQGEGMVVGQKTMFIRTAGCDYSCAWCDSAFTWDGSAKDQIRQMTAEDVWNELVEIGGENFSHVTISG
GNPVLLKNIEFLLSILKENGMRTAIETQGSKWQDWLLEIDEITISPKPPSSTMNTDFQKLDDVIQKLAGKDISLKVVVFD
DYDFEYAVKMHERYPEVPFFLQVGNDDTKTVDDAMLIKKLLDKYEWLIEKAVNCKEMNNAKVLPQLHALVWGNKRGV

Specific function: Catalyzes the conversion of 6-carboxy-5,6,7,8- tetrahydropterin (CPH4) to 7-carboxy-7-deazaguanine (CDG) [H]

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. 7-carboxy-7- deazaguanine synthase family [H]

Homologues:

Organism=Escherichia coli, GI1789139, Length=123, Percent_Identity=32.520325203252, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017742
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 26946; Mature: 26815

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIPVLEIFGPTIQGEGMVVGQKTMFIRTAGCDYSCAWCDSAFTWDGSAKDQIRQMTAE
CCCCCEEEEECCEECCCCEEEECEEEEEEECCCCCEEEECCCCEECCCCCHHHHHHHHHH
DVWNELVEIGGENFSHVTISGGNPVLLKNIEFLLSILKENGMRTAIETQGSKWQDWLLEI
HHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHEEE
DEITISPKPPSSTMNTDFQKLDDVIQKLAGKDISLKVVVFDDYDFEYAVKMHERYPEVPF
EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHEEHHHCCCCCE
FLQVGNDDTKTVDDAMLIKKLLDKYEWLIEKAVNCKEMNNAKVLPQLHALVWGNKRGV
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKIPVLEIFGPTIQGEGMVVGQKTMFIRTAGCDYSCAWCDSAFTWDGSAKDQIRQMTAE
CCCCEEEEECCEECCCCEEEECEEEEEEECCCCCEEEECCCCEECCCCCHHHHHHHHHH
DVWNELVEIGGENFSHVTISGGNPVLLKNIEFLLSILKENGMRTAIETQGSKWQDWLLEI
HHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHEEE
DEITISPKPPSSTMNTDFQKLDDVIQKLAGKDISLKVVVFDDYDFEYAVKMHERYPEVPF
EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHEEHHHCCCCCE
FLQVGNDDTKTVDDAMLIKKLLDKYEWLIEKAVNCKEMNNAKVLPQLHALVWGNKRGV
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]