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The map label for this gene is mcpA [C]

Identifier: 222094327

GI number: 222094327

Start: 630261

End: 632243

Strand: Direct

Name: mcpA [C]

Synonym: BCQ_0641

Alternate gene names: 222094327

Gene position: 630261-632243 (Clockwise)

Preceding gene: 222094326

Following gene: 222094328

Centisome position: 12.09

GC content: 34.59

Gene sequence:

>1983_bases
ATGCAAAAAATATTTAACTGGGTTAAATGTATGAGTATCAAGAAAAAATTAATTATTTCATTTTTTCTAATTTTAACTAT
ACCAGGACTTATTATCGGTGGTGTTTCATATCAAACTGCCAAAACAAATTTTGAACAACAAATCACAGGTAAAGCAAAGG
AAAACATTTCGATTTTAAATACTGTTATTTCTCAAAATATAGAAGAGAAATTTGTTGATGCAGCATACTTTGCAGACATC
TTAACAGAGGATACATATCCAAACGGACAAGAAGAAATAGTAAGAACAAAGTTAGCGCAATATATAAAACTTCATCCAGA
AGTAGAAGGTATTTATATTGGAACGCAGACAGGAAAGTTTATAAGAGAACCATTTATCAAAATGGATGATGGGTATAATC
CAACAGATAGATCTTGGTATAAAGAAGCACATGAAAATAAAGGGAAAGTAATTGTTACTGCACCATATCAATCAGCATCT
ACAAAAAATATGGTAGTGACAATTGCAAAAGAAGTAAAAGATGGTAAAGGTGTTATAGGAATTAACTTAAATCTAGATAA
CATCTTGAAAATTTCCAAAATGATTAACATTGGTGAAAAAGGTTATGCAGTTATTTTAGATCAAAATAAGCAAATTGTTA
GTCATCCATCTAGAAAACCAGGTGCAAAAGTTACTGACCCTTGGATTAAACCGATTTATGAAGAAAAACAAGGAAATGTC
TCTTATACAGAACAAGATGATAAAAAGAATTTAATCTTTGCAACAAATGAGAAAACGGGCTGGAAAGTAGTTGGAGTTAT
GTTTGATGAAGAAATTACCCAAGCTGCGAATCCAGTATTTTATAAGACTTTTATTGTTATTGCTATCGCTATTGTATTTG
GTAGTGTATTAATTTATTTCATTACAAAGTCTATTACAAGACCATTAAGAAAAATAGCTGACTCGGCACACAAAATTAGT
AAGGGAGATTTAACAGAGAAAATTACAATCCATTCCAAGGATGACATAGGGAAATTAGGGAATTCCTTTAATGAAATGTC
TGCCTCTTTACAAGATGTGATTACTCAAATTAGTTTTTCAGCAGAACATGTCGCTGCATCGGCTGAAGAGTTAACAGCGA
GCGTACAGCAAGCAAATGATGCGACAGATCAAATTACAATTGCAATGGAACAAGTATCAGGTGGGGCTGAATCACAAAGT
CAAGGTGTTGAAGAAGGTGCGGCTACATTACAACAAGTAAATATAGCAATTCAAGATGTAACTGGAAGTGCAGAATCAAT
TTCTATTTCCTCATTGCATGCGAGAGAAAGAGCTGAAGAAGGGGAAGAATTGGTTGAGCAGACAGCAAAACAAATGCAGT
CTATTTCTAGGTCGGTATCCGAGTCAGATGCCATTATTAAACTTCTTGATGAGAAATCCAAGCAGGTAGGGGCTATTTCT
GAAGCAATTCAAAATATCGCTACTCAAACGAACCTTTTAGCTTTAAATGCGGCTATTGAAGCAGCAAGAGCAGGTGAACA
GGGCCGAGGGTTTGCTATTGTAGCAGATGAGGTTAGAAAACTAGCGGAGCAATCAGGAGAATCATCTGGAGAAATCGCGA
ATTTAATTGCAGAAATTAAGGCCGATATTGAACATACTGTTAAGGCGATGGATAATGTGAATGGGGAAGTTCAACAAGGA
CTTGATGTTGTAACAAAAACGAAAGTAAGTTTTACGGAAATTTTAAGTTCTACTACACACATTGTTTCTCAAGTTAATCA
AATGGTAGAAACAACGAAGAGAATTGCTGGAGATGCAAATGAAGTGACAAATGCTATTGATGAAATTGCAGCGGCTGCAG
AAGAAAATACAGCTAGTATGCAAAGTGTTGCTGCTTCAACAGAAGAACAAGTGAATTCAATGGAAGAAATTAGTTCAGCT
TCACACAACTTAGCTGAGATGGCCGAAGAACTACAAGCGATGACTAGTAAATTTAAAGTATAA

Upstream 100 bases:

>100_bases
TAATTGACGAAAATATTACATGTTATCATTATATATTGTTTTATATATTTTACTTGTATAAAATTACACAAGTATCCACA
TTCCATAAAGGAGGCTTATT

Downstream 100 bases:

>100_bases
TAACAGCAGATAAGTAAGGTGAAAATAATATCACCTTACTTATTTTTCTATTCAGCAATTAGGGGAGTCATTAACGGGAT
GAAAAAAAGAAAAAGACTAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILNTVISQNIEEKFVDAAYFADI
LTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKFIREPFIKMDDGYNPTDRSWYKEAHENKGKVIVTAPYQSAS
TKNMVVTIAKEVKDGKGVIGINLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEEKQGNV
SYTEQDDKKNLIFATNEKTGWKVVGVMFDEEITQAANPVFYKTFIVIAIAIVFGSVLIYFITKSITRPLRKIADSAHKIS
KGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFSAEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQS
QGVEEGAATLQQVNIAIQDVTGSAESISISSLHARERAEEGEELVEQTAKQMQSISRSVSESDAIIKLLDEKSKQVGAIS
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIKADIEHTVKAMDNVNGEVQQG
LDVVTKTKVSFTEILSSTTHIVSQVNQMVETTKRIAGDANEVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSA
SHNLAEMAEELQAMTSKFKV

Sequences:

>Translated_660_residues
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILNTVISQNIEEKFVDAAYFADI
LTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKFIREPFIKMDDGYNPTDRSWYKEAHENKGKVIVTAPYQSAS
TKNMVVTIAKEVKDGKGVIGINLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEEKQGNV
SYTEQDDKKNLIFATNEKTGWKVVGVMFDEEITQAANPVFYKTFIVIAIAIVFGSVLIYFITKSITRPLRKIADSAHKIS
KGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFSAEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQS
QGVEEGAATLQQVNIAIQDVTGSAESISISSLHARERAEEGEELVEQTAKQMQSISRSVSESDAIIKLLDEKSKQVGAIS
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIKADIEHTVKAMDNVNGEVQQG
LDVVTKTKVSFTEILSSTTHIVSQVNQMVETTKRIAGDANEVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSA
SHNLAEMAEELQAMTSKFKV
>Mature_660_residues
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILNTVISQNIEEKFVDAAYFADI
LTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKFIREPFIKMDDGYNPTDRSWYKEAHENKGKVIVTAPYQSAS
TKNMVVTIAKEVKDGKGVIGINLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEEKQGNV
SYTEQDDKKNLIFATNEKTGWKVVGVMFDEEITQAANPVFYKTFIVIAIAIVFGSVLIYFITKSITRPLRKIADSAHKIS
KGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFSAEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQS
QGVEEGAATLQQVNIAIQDVTGSAESISISSLHARERAEEGEELVEQTAKQMQSISRSVSESDAIIKLLDEKSKQVGAIS
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIKADIEHTVKAMDNVNGEVQQG
LDVVTKTKVSFTEILSSTTHIVSQVNQMVETTKRIAGDANEVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSA
SHNLAEMAEELQAMTSKFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=387, Percent_Identity=29.4573643410853, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1787690, Length=379, Percent_Identity=29.5514511873351, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1788195, Length=317, Percent_Identity=30.9148264984227, Blast_Score=122, Evalue=6e-29,
Organism=Escherichia coli, GI1788194, Length=361, Percent_Identity=27.1468144044321, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1789453, Length=360, Percent_Identity=26.3888888888889, Blast_Score=110, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 72025; Mature: 72025

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCHHHHHHHHH
TVISQNIEEKFVDAAYFADILTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKF
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
IREPFIKMDDGYNPTDRSWYKEAHENKGKVIVTAPYQSASTKNMVVTIAKEVKDGKGVIG
HHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCEEE
INLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEEKQGNV
EECCHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
SYTEQDDKKNLIFATNEKTGWKVVGVMFDEEITQAANPVFYKTFIVIAIAIVFGSVLIYF
CCCCCCCCCCEEEEECCCCCCEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ITKSITRPLRKIADSAHKISKGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFS
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHCC
AEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQSQGVEEGAATLQQVNIAIQDV
HHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCCHHHCCHHHHHHHHHHHHHHEEEC
TGSAESISISSLHARERAEEGEELVEQTAKQMQSISRSVSESDAIIKLLDEKSKQVGAIS
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
ADIEHTVKAMDNVNGEVQQGLDVVTKTKVSFTEILSSTTHIVSQVNQMVETTKRIAGDAN
HHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSASHNLAEMAEELQAMTSKFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCHHHHHHHHH
TVISQNIEEKFVDAAYFADILTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKF
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
IREPFIKMDDGYNPTDRSWYKEAHENKGKVIVTAPYQSASTKNMVVTIAKEVKDGKGVIG
HHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCEEE
INLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEEKQGNV
EECCHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
SYTEQDDKKNLIFATNEKTGWKVVGVMFDEEITQAANPVFYKTFIVIAIAIVFGSVLIYF
CCCCCCCCCCEEEEECCCCCCEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ITKSITRPLRKIADSAHKISKGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFS
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHCC
AEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQSQGVEEGAATLQQVNIAIQDV
HHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCCHHHCCHHHHHHHHHHHHHHEEEC
TGSAESISISSLHARERAEEGEELVEQTAKQMQSISRSVSESDAIIKLLDEKSKQVGAIS
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
ADIEHTVKAMDNVNGEVQQGLDVVTKTKVSFTEILSSTTHIVSQVNQMVETTKRIAGDAN
HHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSASHNLAEMAEELQAMTSKFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA