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The map label for this gene is yoeD [H]

Identifier: 222094133

GI number: 222094133

Start: 416093

End: 416332

Strand: Direct

Name: yoeD [H]

Synonym: BCQ_0426

Alternate gene names: 222094133

Gene position: 416093-416332 (Clockwise)

Preceding gene: 222094131

Following gene: 222094134

Centisome position: 7.98

GC content: 29.58

Gene sequence:

>240_bases
ATGAACGAGTTGTATATAACAGTAGAAGAAGCTGCGGAGTATTTAAATTTACCAAAGTCGTATATTGAAGAGTTAATTCA
GCAAAAGAAAATTCGTGCACTATTTGATGGAGAGCAATATTTATTAAATAAAGAACAATTCAATACACATTTAGAACAAA
TGGAGAAATATAAGCAATTAGTGGAAGAAATATTGAACGAACCAATTCCAGAAGATATGGATGTTAAAGACGAAGATTAA

Upstream 100 bases:

>100_bases
GAATGCATCTACCTGCTTTTTAGGTTGCATTTACAAAATCTTTTTTATTTGTTTACAAAAATAAAGTAAGATACAGTATA
TAGGAAAAAATAATAAAGGA

Downstream 100 bases:

>100_bases
ACTATGGGAAATCCCTTATGAAGATATGCAGAAATGTATCTTCATAAGGGATTTTTTTGTTTAAAGATATTAAAAGCATA
AGGAGTTCTTAGCCTTTCCT

Product: DNA binding domain, excisionase family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MNELYITVEEAAEYLNLPKSYIEELIQQKKIRALFDGEQYLLNKEQFNTHLEQMEKYKQLVEEILNEPIPEDMDVKDED

Sequences:

>Translated_79_residues
MNELYITVEEAAEYLNLPKSYIEELIQQKKIRALFDGEQYLLNKEQFNTHLEQMEKYKQLVEEILNEPIPEDMDVKDED
>Mature_79_residues
MNELYITVEEAAEYLNLPKSYIEELIQQKKIRALFDGEQYLLNKEQFNTHLEQMEKYKQLVEEILNEPIPEDMDVKDED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010093 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9523; Mature: 9523

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELYITVEEAAEYLNLPKSYIEELIQQKKIRALFDGEQYLLNKEQFNTHLEQMEKYKQL
CCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VEEILNEPIPEDMDVKDED
HHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNELYITVEEAAEYLNLPKSYIEELIQQKKIRALFDGEQYLLNKEQFNTHLEQMEKYKQL
CCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VEEILNEPIPEDMDVKDED
HHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]