Click here to switch to the map view.

The map label for this gene is cotB [H]

Identifier: 222094134

GI number: 222094134

Start: 416569

End: 417084

Strand: Direct

Name: cotB [H]

Synonym: BCQ_0427

Alternate gene names: 222094134

Gene position: 416569-417084 (Clockwise)

Preceding gene: 222094133

Following gene: 222094135

Centisome position: 7.99

GC content: 36.24

Gene sequence:

>516_bases
GTGAGTTTATTTCATTGTGATTTTTTGAAAGACTTAATTGGATCTTTTGTGAGAGTAAACAGGGGTGGTCCAGAATCTCA
AAAAGGAACAATAATATCAGTATGTCCGGACTACTTCGTATTGCAGAATGAAAAAGGTGAGCTTTATTACTATCAACTTA
AACATCTAAAGAGTATCACAAAAAATGCGAAAGAATGTGGATCAAGTGATTGCGAGTGGGAAGATTGCGCCTGTGCAGAA
GACTTTGAAGAACTGCTTGAAAGTTTCAAATATTGCTGGGTGAAAATTAATCGCGGTGGTCCAGAGAAAGTGGAAGGCAT
TTTACAAGATGTTTCTTGTGACTTCGTAACATTAATCGTAAAAGAAGAAATTATCTTAATTGCAATAAAGCATATTAAAA
GTGTTAACTATAATGCTTTAGCTTGTGGAGAGAGCGATGAGAGCGACGATAGTAAGGAAAGTAGCAATAATTCAGGTCGT
GCTCGTGCACAAAGACAATCAAGTAGAGGAAGATAA

Upstream 100 bases:

>100_bases
CATATTTTTTTCTAGCTAGGACAAACATAGAGAACGTAACCTGTACAGATACATATACTATCAGTGCAAAAGCTTATAAA
TTAATGGAAGGGGTTTTCTC

Downstream 100 bases:

>100_bases
TAAGAAAGGGGGATACGAAATTGGAGAATGTATTATGTTGTGACCAAATTAAATGTTTAGTTGGTGAGACTGTCAAAGTA
AACCTTCGCGGACCAGAAAG

Product: spore coat protein b

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSLFHCDFLKDLIGSFVRVNRGGPESQKGTIISVCPDYFVLQNEKGELYYYQLKHLKSITKNAKECGSSDCEWEDCACAE
DFEELLESFKYCWVKINRGGPEKVEGILQDVSCDFVTLIVKEEIILIAIKHIKSVNYNALACGESDESDDSKESSNNSGR
ARAQRQSSRGR

Sequences:

>Translated_171_residues
MSLFHCDFLKDLIGSFVRVNRGGPESQKGTIISVCPDYFVLQNEKGELYYYQLKHLKSITKNAKECGSSDCEWEDCACAE
DFEELLESFKYCWVKINRGGPEKVEGILQDVSCDFVTLIVKEEIILIAIKHIKSVNYNALACGESDESDDSKESSNNSGR
ARAQRQSSRGR
>Mature_170_residues
SLFHCDFLKDLIGSFVRVNRGGPESQKGTIISVCPDYFVLQNEKGELYYYQLKHLKSITKNAKECGSSDCEWEDCACAED
FEELLESFKYCWVKINRGGPEKVEGILQDVSCDFVTLIVKEEIILIAIKHIKSVNYNALACGESDESDDSKESSNNSGRA
RAQRQSSRGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19293; Mature: 19162

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFHCDFLKDLIGSFVRVNRGGPESQKGTIISVCPDYFVLQNEKGELYYYQLKHLKSIT
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEECCCCCEEHHHHHHHHHHH
KNAKECGSSDCEWEDCACAEDFEELLESFKYCWVKINRGGPEKVEGILQDVSCDFVTLIV
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCHHHHHHH
KEEIILIAIKHIKSVNYNALACGESDESDDSKESSNNSGRARAQRQSSRGR
HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SLFHCDFLKDLIGSFVRVNRGGPESQKGTIISVCPDYFVLQNEKGELYYYQLKHLKSIT
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEECCCCCEEHHHHHHHHHHH
KNAKECGSSDCEWEDCACAEDFEELLESFKYCWVKINRGGPEKVEGILQDVSCDFVTLIV
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCHHHHHHH
KEEIILIAIKHIKSVNYNALACGESDESDDSKESSNNSGRARAQRQSSRGR
HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 2821284 [H]