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The map label for this gene is gatA [H]

Identifier: 222094078

GI number: 222094078

Start: 347253

End: 348710

Strand: Direct

Name: gatA [H]

Synonym: BCQ_0371

Alternate gene names: 222094078

Gene position: 347253-348710 (Clockwise)

Preceding gene: 222094077

Following gene: 222094079

Centisome position: 6.66

GC content: 39.3

Gene sequence:

>1458_bases
ATGTCATTATTTGATCATTCAGTATCAGAGTTACATAAGAAATTAAACAACAAAGAAATTTCCGTTACGGATTTAGTAGA
AGAATCTTACAAACGTATTGCGGATGTTGAAGATAACGTAAAAGCTTTTCTTACATTAGATGAAGAAAATGCACGCGCAA
AAGCGAAAGAATTAGATGCAAAAATCGGCGCTGAAGATAATGGTTTATTATTCGGTATGCCAATTGGTGTAAAAGATAAC
ATTGTAACTAACGGTCTTCGTACAACTTGTGCGAGCAAAATGTTAGCAAACTTTGATCCAATTTATGATGCGACAGTTGT
GCAAAAGCTAAAAGCTGCTGACACAATTACAATCGGTAAATTAAACATGGACGAGTTCGCAATGGGTTCTTCAAATGAAA
ACTCAGGTTTCTACGCTACGAAAAATCCATGGAACTTAGATTACGTTCCAGGCGGATCTAGTGGTGGTTCTGCAGCAGCT
GTAGCAGCAGGAGAAGTATTATTCTCTCTAGGTTCTGATACAGGTGGTTCTATCCGTCAGCCAGCTGCATATTGCGGCGT
TGTAGGCTTAAAACCAACTTACGGACGTGTATCTCGTTACGGATTAGTTGCATTCGCATCTTCACTGGACCAAATCGGAC
CGATTACACGTACAGTAGAAGATAATGCATACTTATTACAAGCTATTTCAGGTCTTGACCGTATGGATGCAACTTCTGCA
AACGTTGAAGTAGGAAACTACTTAGCTGGTTTAACAGGCGACGTTAAAGGTTTACGTATTGCTGTACCGAAAGAATACTT
AGGAGAAGGTGTTGGCGAAGAAGCTCGTGAGTCAGTACTAGCTGCTTTAAAAGTATTAGAAGGTATGGGCGCAACTTGGG
AGGAAGTATCTCTTCCGCACTCTAAATACGCTCTAGCAACGTATTACTTATTATCTTCTTCTGAAGCATCTGCGAACCTT
TCACGCTTTGATGGCGTACGTTACGGTGTTCGTTCTGATAATGTAAATAATTTATTAGACCTTTACAAAAACACACGTAG
CGAAGGTTTTGGTGATGAAGTAAAACGTCGTATTATGCTTGGTACATTTGCACTTAGCTCTGGTTACTATGATGCATATT
ACAAAAAAGCACAACAAGTACGTACATTAATTAAAAACGACTTTGAAAATGTATTTGCTAACTACGATGTTATTATTGGA
CCAACAACGCCAACTCCGGCATTTAAAGTGGGCGAAAAAGTTGATGATCCAATGACAATGTATGCAAACGACATTTTAAC
AATCCCAGTAAACTTAGCGGGTGTTCCAGCGATTTCTGTTCCATGTGGATTCGGTGCTAACAACATGCCACTTGGTCTAC
AAATCATTGGTAAACACTTCGATGAAGCGACAATTTACCGCGTTGCACATGCGTTTGAGCAAGCAACAGACTATCATACA
AAAAAAGCAAGTCTGTAA

Upstream 100 bases:

>100_bases
AAAAGGTTTACCAGTTGAAGAAGTATTAAAAAATGCACCGGATCACAAAGATAATCAAATCCGTGTTCCAGCAGTATTAG
AATAGAGGAGGGGAATTTCG

Downstream 100 bases:

>100_bases
GGAGGCGAGCATAGATGAATTTAGAAACAATTATTGGTTTAGAGGTTCACGTTGAGTTAAAAACAAATTCGAAAATTTTC
TCTGCGAGTCCAACAGAATT

Product: aspartyl/glutamyl-tRNA amidotransferase subunit a

Products: ADP; phosphate; Gln-tRNA(Gln); L-glutamate

Alternate protein names: Glu-ADT subunit A [H]

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSLFDHSVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAEDNGLLFGMPIGVKDN
IVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAA
VAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSA
NVEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHSKYALATYYLLSSSEASANL
SRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLGTFALSSGYYDAYYKKAQQVRTLIKNDFENVFANYDVIIG
PTTPTPAFKVGEKVDDPMTMYANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDYHT
KKASL

Sequences:

>Translated_485_residues
MSLFDHSVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAEDNGLLFGMPIGVKDN
IVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAA
VAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSA
NVEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHSKYALATYYLLSSSEASANL
SRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLGTFALSSGYYDAYYKKAQQVRTLIKNDFENVFANYDVIIG
PTTPTPAFKVGEKVDDPMTMYANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDYHT
KKASL
>Mature_484_residues
SLFDHSVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAEDNGLLFGMPIGVKDNI
VTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAV
AAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSAN
VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHSKYALATYYLLSSSEASANLS
RFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLGTFALSSGYYDAYYKKAQQVRTLIKNDFENVFANYDVIIGP
TTPTPAFKVGEKVDDPMTMYANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDYHTK
KASL

Specific function: Furnishes a means for formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu- tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activa

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family [H]

Homologues:

Organism=Homo sapiens, GI222831590, Length=501, Percent_Identity=38.5229540918164, Blast_Score=321, Evalue=1e-87,
Organism=Homo sapiens, GI195972892, Length=487, Percent_Identity=25.6673511293634, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI166795287, Length=161, Percent_Identity=34.1614906832298, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17543272, Length=442, Percent_Identity=37.3303167420815, Blast_Score=271, Evalue=6e-73,
Organism=Caenorhabditis elegans, GI17537465, Length=501, Percent_Identity=25.9481037924152, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17556264, Length=187, Percent_Identity=35.2941176470588, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17538252, Length=513, Percent_Identity=22.6120857699805, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71990152, Length=156, Percent_Identity=32.6923076923077, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17556278, Length=170, Percent_Identity=35.2941176470588, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17556276, Length=170, Percent_Identity=35.2941176470588, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538254, Length=227, Percent_Identity=29.5154185022026, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6323950, Length=462, Percent_Identity=34.8484848484849, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6319685, Length=413, Percent_Identity=30.9927360774818, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6320448, Length=170, Percent_Identity=32.9411764705882, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24648113, Length=502, Percent_Identity=37.2509960159363, Blast_Score=293, Evalue=2e-79,
Organism=Drosophila melanogaster, GI24652985, Length=496, Percent_Identity=26.4112903225806, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI19922090, Length=496, Percent_Identity=26.4112903225806, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24652981, Length=496, Percent_Identity=26.4112903225806, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24652983, Length=496, Percent_Identity=26.4112903225806, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI161078093, Length=509, Percent_Identity=26.9155206286837, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24648435, Length=492, Percent_Identity=24.5934959349593, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24648437, Length=492, Percent_Identity=24.5934959349593, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI45550774, Length=492, Percent_Identity=24.5934959349593, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24644968, Length=245, Percent_Identity=32.2448979591837, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI21356731, Length=499, Percent_Identity=24.0480961923848, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24648441, Length=417, Percent_Identity=25.1798561151079, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24648439, Length=417, Percent_Identity=25.1798561151079, Blast_Score=97, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000120
- InterPro:   IPR020556
- InterPro:   IPR004412 [H]

Pfam domain/function: PF01425 Amidase [H]

EC number: 6.3.5.7

Molecular weight: Translated: 52322; Mature: 52190

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00571 AMIDASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFDHSVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDA
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH
KIGAEDNGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGK
HCCCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEC
LNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQ
CCHHHHCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSA
CHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCHHCCCCCC
NVEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPH
CEEHHHHHHCCCCCCCCEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCC
SKYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIML
CHHHHEEEEEEECCCCCCCHHHHCCEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
GTFALSSGYYDAYYKKAQQVRTLIKNDFENVFANYDVIIGPTTPTPAFKVGEKVDDPMTM
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCHHH
YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDYHT
HCCCEEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCH
KKASL
HCCCC
>Mature Secondary Structure 
SLFDHSVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDA
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH
KIGAEDNGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGK
HCCCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEC
LNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQ
CCHHHHCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSA
CHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCHHCCCCCC
NVEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPH
CEEHHHHHHCCCCCCCCEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCC
SKYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIML
CHHHHEEEEEEECCCCCCCHHHHCCEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
GTFALSSGYYDAYYKKAQQVRTLIKNDFENVFANYDVIIGPTTPTPAFKVGEKVDDPMTM
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCHHH
YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDYHT
HCCCEEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCH
KKASL
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; Glu-tRNA(Gln); L-glutamine

Specific reaction: ATP + Glu-tRNA(Gln) + L-glutamine = ADP + phosphate + Gln-tRNA(Gln) + L-glutamate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA