| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636269
Identifier: 221636269
GI number: 221636269
Start: 846141
End: 846287
Strand: Reverse
Name: 221636269
Synonym: trd_A0863
Alternate gene names: NA
Gene position: 846287-846141 (Counterclockwise)
Preceding gene: 221636271
Following gene: 221636268
Centisome position: 92.21
GC content: 64.63
Gene sequence:
>147_bases GTGCGTTCGCTGGGGAAGATCGTGTCATTGCCTCACGGGCTGGAATGCGACGAGATGCCCGCTCGCCAGGATGTGGCCAG GCTGATCGGCGCGAGCGAGCAACGCTGCAGGACGGTTCGGCAAACGTGGCGGGCACGCTATGGTTAG
Upstream 100 bases:
>100_bases GCGAGGAGGCCAGGGGGTCGCACTGTCACGCCATAACAGGGAGCTGATGCACCAGAAGGTTTGGTGGGCCAGAGCGATCA GATCGCGCGGAGTCGGCACT
Downstream 100 bases:
>100_bases TATTCGTTTTCGGCAGTGGGGCTGCCACGGGGAAGGGGTGCGGGATGCGGGTGACATGGTCGATTCTGCTCGCGATCGTC TCGATCGGCACCGGGATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MRSLGKIVSLPHGLECDEMPARQDVARLIGASEQRCRTVRQTWRARYG
Sequences:
>Translated_48_residues MRSLGKIVSLPHGLECDEMPARQDVARLIGASEQRCRTVRQTWRARYG >Mature_48_residues MRSLGKIVSLPHGLECDEMPARQDVARLIGASEQRCRTVRQTWRARYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5499; Mature: 5499
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLGKIVSLPHGLECDEMPARQDVARLIGASEQRCRTVRQTWRARYG CCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSLGKIVSLPHGLECDEMPARQDVARLIGASEQRCRTVRQTWRARYG CCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA