| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636230
Identifier: 221636230
GI number: 221636230
Start: 809488
End: 809844
Strand: Reverse
Name: 221636230
Synonym: trd_A0824
Alternate gene names: NA
Gene position: 809844-809488 (Counterclockwise)
Preceding gene: 221636231
Following gene: 221636229
Centisome position: 88.24
GC content: 63.87
Gene sequence:
>357_bases ATGAGTGAGTACCGTGAAGCGCTGGCTATCATCTTGAATGCGGTACGGTCGGCTGGCCTCCCATTGACCGGCTGGTGCCT GGAGCGGGACCGTGTGCATTTCCTGTTGAGCGGGGGTATGGAAGTGACGGTTCCGCTGGATCGGCTGTTCGGGGGGTCGC CGAGCACGGTGGTGGCGGAACTCCTCAATGCGGTGGGTTGGCGCACGACGCCGGTGACCGTACGGCCGATGGAAGAGATC GTCGAACTGGCCCCGCAGCAACTGGCACGACTGCGCTTCTTGCACTGGTTGGTGAGCACGGGTCGGCTGCCTGGTGATAC GGAACGGCCGCGATTCGAGCTGGCGACGGCCAGTTGA
Upstream 100 bases:
>100_bases CCGGTTGCCGTCGGTGAGACGCCGGATACTGCCCTGAGCAATCTCCTCGCAGCGCTCGACCGGGCGCGGGAGGGGTGAAG GACTCGAGGAGGGTGGAGCC
Downstream 100 bases:
>100_bases TGGTCGGATCCTCTCTGCCCACTCGTCCGCTATGCTAGCGGCAGCGGATCGGTACGAGGAGCGGTGAGAGCGAGGTCGCG GTGGGCGGAGAGGGGTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSEYREALAIILNAVRSAGLPLTGWCLERDRVHFLLSGGMEVTVPLDRLFGGSPSTVVAELLNAVGWRTTPVTVRPMEEI VELAPQQLARLRFLHWLVSTGRLPGDTERPRFELATAS
Sequences:
>Translated_118_residues MSEYREALAIILNAVRSAGLPLTGWCLERDRVHFLLSGGMEVTVPLDRLFGGSPSTVVAELLNAVGWRTTPVTVRPMEEI VELAPQQLARLRFLHWLVSTGRLPGDTERPRFELATAS >Mature_117_residues SEYREALAIILNAVRSAGLPLTGWCLERDRVHFLLSGGMEVTVPLDRLFGGSPSTVVAELLNAVGWRTTPVTVRPMEEIV ELAPQQLARLRFLHWLVSTGRLPGDTERPRFELATAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13082; Mature: 12951
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYREALAIILNAVRSAGLPLTGWCLERDRVHFLLSGGMEVTVPLDRLFGGSPSTVVAE CCHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCEEEEEHHHHCCCCCHHHHHH LLNAVGWRTTPVTVRPMEEIVELAPQQLARLRFLHWLVSTGRLPGDTERPRFELATAS HHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC >Mature Secondary Structure SEYREALAIILNAVRSAGLPLTGWCLERDRVHFLLSGGMEVTVPLDRLFGGSPSTVVAE CHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCEEEEEHHHHCCCCCHHHHHH LLNAVGWRTTPVTVRPMEEIVELAPQQLARLRFLHWLVSTGRLPGDTERPRFELATAS HHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA