| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636231
Identifier: 221636231
GI number: 221636231
Start: 809867
End: 810118
Strand: Reverse
Name: 221636231
Synonym: trd_A0825
Alternate gene names: NA
Gene position: 810118-809867 (Counterclockwise)
Preceding gene: 221636232
Following gene: 221636230
Centisome position: 88.27
GC content: 65.08
Gene sequence:
>252_bases GTGAACGAGAACGGTGCTCTGATTCGATGGCCGATCACGATTTTTCGCGATCCGTGCAGTGACGAACGCCAGCCGCGCTG GGTTGCGGTCGCCTGTGAGCCGGCGCAACTACCGCCGGAGGCTGCTCAGTCCTGTTTCGTCCTGCAGTACTGGCGCCGAC AACTGCGTTGTCCGCCGGTTGCCGTCGGTGAGACGCCGGATACTGCCCTGAGCAATCTCCTCGCAGCGCTCGACCGGGCG CGGGAGGGGTGA
Upstream 100 bases:
>100_bases AACTTGGGACGAACGGCCTAGAGGCTCGTGGAGCTGCGCGGCCGAGAATAGAGGGTGAAGCAGGTTCGCACCGGACAAGC GAGGGGCGGCAGGGCTAGCG
Downstream 100 bases:
>100_bases AGGACTCGAGGAGGGTGGAGCCATGAGTGAGTACCGTGAAGCGCTGGCTATCATCTTGAATGCGGTACGGTCGGCTGGCC TCCCATTGACCGGCTGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MNENGALIRWPITIFRDPCSDERQPRWVAVACEPAQLPPEAAQSCFVLQYWRRQLRCPPVAVGETPDTALSNLLAALDRA REG
Sequences:
>Translated_83_residues MNENGALIRWPITIFRDPCSDERQPRWVAVACEPAQLPPEAAQSCFVLQYWRRQLRCPPVAVGETPDTALSNLLAALDRA REG >Mature_83_residues MNENGALIRWPITIFRDPCSDERQPRWVAVACEPAQLPPEAAQSCFVLQYWRRQLRCPPVAVGETPDTALSNLLAALDRA REG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9334; Mature: 9334
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENGALIRWPITIFRDPCSDERQPRWVAVACEPAQLPPEAAQSCFVLQYWRRQLRCPPV CCCCCCEEEECCEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC AVGETPDTALSNLLAALDRAREG CCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNENGALIRWPITIFRDPCSDERQPRWVAVACEPAQLPPEAAQSCFVLQYWRRQLRCPPV CCCCCCEEEECCEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC AVGETPDTALSNLLAALDRAREG CCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA