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The map label for this gene is ybgK [H]

Identifier: 221636175

GI number: 221636175

Start: 749918

End: 750910

Strand: Reverse

Name: ybgK [H]

Synonym: trd_A0769

Alternate gene names: 221636175

Gene position: 750910-749918 (Counterclockwise)

Preceding gene: 221636176

Following gene: 221636174

Centisome position: 81.82

GC content: 65.46

Gene sequence:

>993_bases
ATGCTCGAGGTACGGAACGGCGGCTTCGAAACGACGGTACAGGACTATCCGGGGCGGATCGGGATGCTGTCGCTCGGCTT
CGCACCGGCGGGGCCGATGGACGACTATGCGTTCCGTTTCGCCAACGTGCTCGTCGGCAATCCCCCGAGTGCGGCTGGGC
TGGAAATCACGGCCGGCGGGCTCGTGGTTGCCTTCCGGGACGAGCGGGCGATCGCGATCTGCGGTGCCGACATGGGGGCG
AAACTGAACGGCCAGCCGGTGGAACTTTGGCGCAGCTACCTGGTGCGAGCTGGCGATGTCCTGGAGTTCGACTATCTACA
GGGGGCCGGCTTCCGCACGTACCTGGCAGTGAGTGGCGGGATCGACGTTCCACCGGTGCTGGGGAGCCGCGCCACGTATC
TGCCCGGTGCCATCGGCGGGCTGGAAGGGCGGAAGCTGCAGGCTGGTGACACGTTGCCGTTGGGCGAGCCGGTCGTCGAT
CCGGCGCAGGCAGCTGGACGACGCGTGCCGAGCGCGCTGGTGCCGAGCTATCCGGGTTACAACGAGGTGTGGGAAGTGGA
GGCGACGCGCGGGCCGCAAGCGGATCCCGATTACATGACGGCCGACGACATGGCCTTCTTCTTCTCGCACCAATGGAAGC
TGGACGCTGCCTCCAACCGGACCGGCTACCGGCTGGACATCCACAAGTGGCAGTGGGCCCGCACGAGTGGTGGTGCCGGT
GGCGGGCATCCCTCGAACATCCTGGACAACGGCTATCCCGTCGGGGCCGTGAATGTCTGCGGTGATCAGCCGATCATCCT
CTGCATCGATGGTCCCACACTGGGTGGCTTCATCTGCAACGCCGTGGTCGCTAAGGCTGCGATGTGGAAGCTCGGGCAGA
TGGTCCCGGGTTGGAGCTACATTCGGTTCAAGGAGGTCACGCTCGAGGAGGCGATCGCGCTCCTCAAGAAGCAGGACGAG
ACGATCCACGAGAGCAACCTCGAGAGGAGCTGA

Upstream 100 bases:

>100_bases
GGAGCCGGAAGCGGAGGCGTTCCGGCGTCGCCAGGCCGAGGCGGCTGCTCGCGTGCCGGTTCCGTGATGCTCGCGAGAAG
GCAGGAAGGGTGGAGGAGCC

Downstream 100 bases:

>100_bases
GCCATGGCCCGCGTCATCGACATCAACTGCGACATGGGCGAAAGCTTCGGTCGCTGGACGCTCGGCAACGATGCAGCACT
GATGCCATACATCACCTCAG

Product: urea amidolyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MLEVRNGGFETTVQDYPGRIGMLSLGFAPAGPMDDYAFRFANVLVGNPPSAAGLEITAGGLVVAFRDERAIAICGADMGA
KLNGQPVELWRSYLVRAGDVLEFDYLQGAGFRTYLAVSGGIDVPPVLGSRATYLPGAIGGLEGRKLQAGDTLPLGEPVVD
PAQAAGRRVPSALVPSYPGYNEVWEVEATRGPQADPDYMTADDMAFFFSHQWKLDAASNRTGYRLDIHKWQWARTSGGAG
GGHPSNILDNGYPVGAVNVCGDQPIILCIDGPTLGGFICNAVVAKAAMWKLGQMVPGWSYIRFKEVTLEEAIALLKKQDE
TIHESNLERS

Sequences:

>Translated_330_residues
MLEVRNGGFETTVQDYPGRIGMLSLGFAPAGPMDDYAFRFANVLVGNPPSAAGLEITAGGLVVAFRDERAIAICGADMGA
KLNGQPVELWRSYLVRAGDVLEFDYLQGAGFRTYLAVSGGIDVPPVLGSRATYLPGAIGGLEGRKLQAGDTLPLGEPVVD
PAQAAGRRVPSALVPSYPGYNEVWEVEATRGPQADPDYMTADDMAFFFSHQWKLDAASNRTGYRLDIHKWQWARTSGGAG
GGHPSNILDNGYPVGAVNVCGDQPIILCIDGPTLGGFICNAVVAKAAMWKLGQMVPGWSYIRFKEVTLEEAIALLKKQDE
TIHESNLERS
>Mature_330_residues
MLEVRNGGFETTVQDYPGRIGMLSLGFAPAGPMDDYAFRFANVLVGNPPSAAGLEITAGGLVVAFRDERAIAICGADMGA
KLNGQPVELWRSYLVRAGDVLEFDYLQGAGFRTYLAVSGGIDVPPVLGSRATYLPGAIGGLEGRKLQAGDTLPLGEPVVD
PAQAAGRRVPSALVPSYPGYNEVWEVEATRGPQADPDYMTADDMAFFFSHQWKLDAASNRTGYRLDIHKWQWARTSGGAG
GGHPSNILDNGYPVGAVNVCGDQPIILCIDGPTLGGFICNAVVAKAAMWKLGQMVPGWSYIRFKEVTLEEAIALLKKQDE
TIHESNLERS

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=327, Percent_Identity=36.697247706422, Blast_Score=150, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6319685, Length=323, Percent_Identity=40.8668730650155, Blast_Score=244, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 35336; Mature: 35336

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVRNGGFETTVQDYPGRIGMLSLGFAPAGPMDDYAFRFANVLVGNPPSAAGLEITAGG
CCEECCCCCCCCHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHEECCCCCCCCEEEECCC
LVVAFRDERAIAICGADMGAKLNGQPVELWRSYLVRAGDVLEFDYLQGAGFRTYLAVSGG
EEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCEEEEEEECC
IDVPPVLGSRATYLPGAIGGLEGRKLQAGDTLPLGEPVVDPAQAAGRRVPSALVPSYPGY
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCC
NEVWEVEATRGPQADPDYMTADDMAFFFSHQWKLDAASNRTGYRLDIHKWQWARTSGGAG
CCEEEEEECCCCCCCCCCCCHHHEEEEEECEEEEECCCCCCCEEEEEEEEEEECCCCCCC
GGHPSNILDNGYPVGAVNVCGDQPIILCIDGPTLGGFICNAVVAKAAMWKLGQMVPGWSY
CCCCCCHHCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE
IRFKEVTLEEAIALLKKQDETIHESNLERS
EEEEHHHHHHHHHHHHHCCCHHHHCCCCCC
>Mature Secondary Structure
MLEVRNGGFETTVQDYPGRIGMLSLGFAPAGPMDDYAFRFANVLVGNPPSAAGLEITAGG
CCEECCCCCCCCHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHEECCCCCCCCEEEECCC
LVVAFRDERAIAICGADMGAKLNGQPVELWRSYLVRAGDVLEFDYLQGAGFRTYLAVSGG
EEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCEEEEEEECC
IDVPPVLGSRATYLPGAIGGLEGRKLQAGDTLPLGEPVVDPAQAAGRRVPSALVPSYPGY
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCC
NEVWEVEATRGPQADPDYMTADDMAFFFSHQWKLDAASNRTGYRLDIHKWQWARTSGGAG
CCEEEEEECCCCCCCCCCCCHHHEEEEEECEEEEECCCCCCCEEEEEEEEEEECCCCCCC
GGHPSNILDNGYPVGAVNVCGDQPIILCIDGPTLGGFICNAVVAKAAMWKLGQMVPGWSY
CCCCCCHHCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE
IRFKEVTLEEAIALLKKQDETIHESNLERS
EEEEHHHHHHHHHHHHHCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]