The gene/protein map for NC_011961 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636128

Identifier: 221636128

GI number: 221636128

Start: 713687

End: 714430

Strand: Reverse

Name: 221636128

Synonym: trd_A0722

Alternate gene names: NA

Gene position: 714430-713687 (Counterclockwise)

Preceding gene: 221636129

Following gene: 221636127

Centisome position: 77.85

GC content: 73.25

Gene sequence:

>744_bases
ATGCTGAAGCTCCCGCTGCTGCGCAGCGATATCGCCTACGTCGCGCCCGAAGTAGGCAGCGACGGGCGACTGGGCGTTTG
GCTGGGACGCCGGCACCTGGCCGTCTGGTGGCGGGGGAACGGTCCCTGGCCGGAGGGTCGTTTCCACTGCCCGAATGGGG
AGCTGTGGTACCTCGTGGAACGAGTGCAGCCGGTCCGGCCGCTCTTCTGGTGGTGGCGCCGGCAGCCCCCGCCGAGCGCC
GTGCGCCTGACGGGAGTGTACGGACCCGCTGAGGGCTGGGGAAAGCGTTTCCGGCTCGTCTTGCCGGTGGAGCCCTGTCC
GGAAGCGGCCGAGGAGCTGCGCTTCGATCCTGGCCCGACGGTGGCGGTGCTGCAGGCGGAACCGTTCTACCAGGCGGCCC
GGCGTGCGATCCTGGCGCGGGGCGGCAAACAGGCGCAGGGGGTGTTGTTCACGATCGCGCCGGGGTCGGAGGGACCGGTG
GCCCACTCGGAGACGCAAGACGGGGCAGGCGAGTTGGTGCCGCTGGCGGGTGAGCTCCTGGTCGCTGAAGCGCTGCTGGT
GCCGGCGGCCCTGCCCCGCTGGCTCTGGTGGGCCGGCTACCGCGACGACGTCTACCGGTTGACCCGTCCGCCGATCGGGG
GCTGGGCGGCCTGGTGGGGCGACCCGGCGGCAGGGCTGGTCGGCCGCGCCTGGGTCGACGACCGGGGAACGGTGGTCCAG
CGGCGCCGGCGCCGCGCTCCATGA

Upstream 100 bases:

>100_bases
TGTCGCGGAGCAGGAGGCAGCGTAGCGGCCGGCGGGTGTAGCGGGCGTTGCGTATCCTAGTGGCCGGGGAGTCGGTCAGC
GGACGGGGAAGCGGCGGACG

Downstream 100 bases:

>100_bases
CATGCTATACTCGATGCGTCGCCTGATATTTAGGTATTCAGGCAACGCGTGGAGGAAATGTCCCCAGTGGCCCGCTCAGT
GGCGTGCTGACTGAGACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MLKLPLLRSDIAYVAPEVGSDGRLGVWLGRRHLAVWWRGNGPWPEGRFHCPNGELWYLVERVQPVRPLFWWWRRQPPPSA
VRLTGVYGPAEGWGKRFRLVLPVEPCPEAAEELRFDPGPTVAVLQAEPFYQAARRAILARGGKQAQGVLFTIAPGSEGPV
AHSETQDGAGELVPLAGELLVAEALLVPAALPRWLWWAGYRDDVYRLTRPPIGGWAAWWGDPAAGLVGRAWVDDRGTVVQ
RRRRRAP

Sequences:

>Translated_247_residues
MLKLPLLRSDIAYVAPEVGSDGRLGVWLGRRHLAVWWRGNGPWPEGRFHCPNGELWYLVERVQPVRPLFWWWRRQPPPSA
VRLTGVYGPAEGWGKRFRLVLPVEPCPEAAEELRFDPGPTVAVLQAEPFYQAARRAILARGGKQAQGVLFTIAPGSEGPV
AHSETQDGAGELVPLAGELLVAEALLVPAALPRWLWWAGYRDDVYRLTRPPIGGWAAWWGDPAAGLVGRAWVDDRGTVVQ
RRRRRAP
>Mature_247_residues
MLKLPLLRSDIAYVAPEVGSDGRLGVWLGRRHLAVWWRGNGPWPEGRFHCPNGELWYLVERVQPVRPLFWWWRRQPPPSA
VRLTGVYGPAEGWGKRFRLVLPVEPCPEAAEELRFDPGPTVAVLQAEPFYQAARRAILARGGKQAQGVLFTIAPGSEGPV
AHSETQDGAGELVPLAGELLVAEALLVPAALPRWLWWAGYRDDVYRLTRPPIGGWAAWWGDPAAGLVGRAWVDDRGTVVQ
RRRRRAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27606; Mature: 27606

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLPLLRSDIAYVAPEVGSDGRLGVWLGRRHLAVWWRGNGPWPEGRFHCPNGELWYLVE
CCCCCCHHCCHHHCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCEECCCCCEEEEEE
RVQPVRPLFWWWRRQPPPSAVRLTGVYGPAEGWGKRFRLVLPVEPCPEAAEELRFDPGPT
CCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCC
VAVLQAEPFYQAARRAILARGGKQAQGVLFTIAPGSEGPVAHSETQDGAGELVPLAGELL
EEEEECCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHH
VAEALLVPAALPRWLWWAGYRDDVYRLTRPPIGGWAAWWGDPAAGLVGRAWVDDRGTVVQ
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHCCCCCCCHHEEEEECCCCHHHH
RRRRRAP
HHHHCCC
>Mature Secondary Structure
MLKLPLLRSDIAYVAPEVGSDGRLGVWLGRRHLAVWWRGNGPWPEGRFHCPNGELWYLVE
CCCCCCHHCCHHHCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCEECCCCCEEEEEE
RVQPVRPLFWWWRRQPPPSAVRLTGVYGPAEGWGKRFRLVLPVEPCPEAAEELRFDPGPT
CCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCC
VAVLQAEPFYQAARRAILARGGKQAQGVLFTIAPGSEGPVAHSETQDGAGELVPLAGELL
EEEEECCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHH
VAEALLVPAALPRWLWWAGYRDDVYRLTRPPIGGWAAWWGDPAAGLVGRAWVDDRGTVVQ
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHCCCCCCCHHEEEEECCCCHHHH
RRRRRAP
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA