| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636129
Identifier: 221636129
GI number: 221636129
Start: 714536
End: 714928
Strand: Reverse
Name: 221636129
Synonym: trd_A0723
Alternate gene names: NA
Gene position: 714928-714536 (Counterclockwise)
Preceding gene: 221636130
Following gene: 221636128
Centisome position: 77.9
GC content: 66.16
Gene sequence:
>393_bases TTGGACGAACTGATCGGTGAGCAACCGACACTAATCATGTTCGACGAGATCGCGCGCTATCTTCGGGCAGCAGACGCGGT GCCGACGGCGACCGGGCGCGGGACGCTGGCTGACCAGACAATCGCGTTCCTGATGCCGCTGCTCGAGTTCGCGGCCAGCC GCCAAGGGGTCGTGGTGGTGCTCACGCTGGCTGATCCCACCGATGTCTTCGGTCAGGAGAGCGAGGCGTTGTTGCGGCAG CTCAGCGAGGCTAGCCGCATCACGGCTCGGTCGGAGCGGGTCCTGCCACCGACCTTGAAGGAAGAGACGCCGGCGATCGG TGCGCATCGGTTGTTCCGCTCGATCGATCGCGCGGCGGCTCGCGAGGCGGCGGACGCGTATCTGGCGTTCTAG
Upstream 100 bases:
>100_bases TCTTCCTGTGGGGTGAACTCGCTTACCAGCTCGGCGGACTGGCTACCGCCTGGTGGGTGAATCGGACCGGGCGACCAAAG CAGCGCCCGGCGGCAGCCTG
Downstream 100 bases:
>100_bases CGGCGTGTCGCGGAGCAGGAGGCAGCGTAGCGGCCGGCGGGTGTAGCGGGCGTTGCGTATCCTAGTGGCCGGGGAGTCGG TCAGCGGACGGGGAAGCGGC
Product: ATPase
Products: NA
Alternate protein names: AAA Family ATPase; ATPase
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MDELIGEQPTLIMFDEIARYLRAADAVPTATGRGTLADQTIAFLMPLLEFAASRQGVVVVLTLADPTDVFGQESEALLRQ LSEASRITARSERVLPPTLKEETPAIGAHRLFRSIDRAAAREAADAYLAF
Sequences:
>Translated_130_residues MDELIGEQPTLIMFDEIARYLRAADAVPTATGRGTLADQTIAFLMPLLEFAASRQGVVVVLTLADPTDVFGQESEALLRQ LSEASRITARSERVLPPTLKEETPAIGAHRLFRSIDRAAAREAADAYLAF >Mature_130_residues MDELIGEQPTLIMFDEIARYLRAADAVPTATGRGTLADQTIAFLMPLLEFAASRQGVVVVLTLADPTDVFGQESEALLRQ LSEASRITARSERVLPPTLKEETPAIGAHRLFRSIDRAAAREAADAYLAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14158; Mature: 14158
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELIGEQPTLIMFDEIARYLRAADAVPTATGRGTLADQTIAFLMPLLEFAASRQGVVVV CCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE LTLADPTDVFGQESEALLRQLSEASRITARSERVLPPTLKEETPAIGAHRLFRSIDRAAA EEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH REAADAYLAF HHHHHHHHCC >Mature Secondary Structure MDELIGEQPTLIMFDEIARYLRAADAVPTATGRGTLADQTIAFLMPLLEFAASRQGVVVV CCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE LTLADPTDVFGQESEALLRQLSEASRITARSERVLPPTLKEETPAIGAHRLFRSIDRAAA EEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH REAADAYLAF HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA