Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636127

Identifier: 221636127

GI number: 221636127

Start: 713373

End: 713555

Strand: Reverse

Name: 221636127

Synonym: trd_A0721

Alternate gene names: NA

Gene position: 713555-713373 (Counterclockwise)

Preceding gene: 221636128

Following gene: 221636126

Centisome position: 77.75

GC content: 69.4

Gene sequence:

>183_bases
ATGGAGCCGAGCAAGGTCGGCAAGCGGGGCACGGTAGTGATGCCGGCCGCCCTGCGCAGACGCTACGGGATCGAGGAGGG
TACCCTGGTGGTGGCCGAGGCCACCGCGGGCATTGACCCTGCCGGTACCGGTGTCGAGAGACGACGACGAGCCAGGTGCC
CTCGTAGGTCGCGAGGAGCGTGA

Upstream 100 bases:

>100_bases
AGGTATTCAGGCAACGCGTGGAGGAAATGTCCCCAGTGGCCCGCTCAGTGGCGTGCTGACTGAGACAGGTATTCAGACAA
CGCGTGGAAGAGAGGCCCAG

Downstream 100 bases:

>100_bases
TGGGGGCTGGATTCTCGTAGGTAAATAGTTAGGGATGGAAGGAGACCTATCGAAATGAGGCATGATGACCCACAGCCACC
GCATCTCGACACCGGGGTCG

Product: SpoVT / AbrB like domain, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MEPSKVGKRGTVVMPAALRRRYGIEEGTLVVAEATAGIDPAGTGVERRRRARCPRRSRGA

Sequences:

>Translated_60_residues
MEPSKVGKRGTVVMPAALRRRYGIEEGTLVVAEATAGIDPAGTGVERRRRARCPRRSRGA
>Mature_60_residues
MEPSKVGKRGTVVMPAALRRRYGIEEGTLVVAEATAGIDPAGTGVERRRRARCPRRSRGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6478; Mature: 6478

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSKVGKRGTVVMPAALRRRYGIEEGTLVVAEATAGIDPAGTGVERRRRARCPRRSRGA
CCCCCCCCCCCEECCHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEPSKVGKRGTVVMPAALRRRYGIEEGTLVVAEATAGIDPAGTGVERRRRARCPRRSRGA
CCCCCCCCCCCEECCHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA