| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636104
Identifier: 221636104
GI number: 221636104
Start: 688617
End: 688730
Strand: Reverse
Name: 221636104
Synonym: trd_A0698
Alternate gene names: NA
Gene position: 688730-688617 (Counterclockwise)
Preceding gene: 221636109
Following gene: 221636099
Centisome position: 75.05
GC content: 53.51
Gene sequence:
>114_bases ATGTCTCGCATCCCTTCACGCACCCTCAACAACCTGTACCGAGTCAGCCATGATAGCGGGCTGATCGAGTATCAGCAACC GAAACGGGTGTGCGTTGTGCGTGATGATATCTGA
Upstream 100 bases:
>100_bases AACGCGGCACGCGGCGAGGAGTCCGCTCGTGCTCGCGGCGACGGCTCCGAGCGCGACCAACCGCAAGACGTTACGCCGCG TCATCCGTTGGTTCTCGTGC
Downstream 100 bases:
>100_bases TCGGATCACAAGAAACCCAGATTGCCGTCGGTCTCGTGCGGTATGACAACGATGAAGAGGACATTTGTGCAGCCTGAGTG CTGCGATTTCTTACCACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 37; Mature: 36
Protein sequence:
>37_residues MSRIPSRTLNNLYRVSHDSGLIEYQQPKRVCVVRDDI
Sequences:
>Translated_37_residues MSRIPSRTLNNLYRVSHDSGLIEYQQPKRVCVVRDDI >Mature_36_residues SRIPSRTLNNLYRVSHDSGLIEYQQPKRVCVVRDDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4360; Mature: 4229
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIPSRTLNNLYRVSHDSGLIEYQQPKRVCVVRDDI CCCCCCHHHHHHEECCCCCCCEEECCCCEEEEEECCC >Mature Secondary Structure SRIPSRTLNNLYRVSHDSGLIEYQQPKRVCVVRDDI CCCCCHHHHHHEECCCCCCCEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA