| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636098
Identifier: 221636098
GI number: 221636098
Start: 680371
End: 682428
Strand: Reverse
Name: 221636098
Synonym: trd_A0692
Alternate gene names: NA
Gene position: 682428-680371 (Counterclockwise)
Preceding gene: 221636099
Following gene: 221636097
Centisome position: 74.36
GC content: 68.8
Gene sequence:
>2058_bases GTGCTGATGCGGTGGACGCCGATCCGGTCCCGGCTGCTCGCCTGGCTCCTGATCCCGGTTCTGCTCCTGGGCGGGTCGCC GCGCTCGCTGGACGGGGCGCAGGCGCACGAGACGACACTTGCGGAGGCGGTGGAATGGGCGGTGGCGGTCGAACGCGCAA CCTGCTCTATCGCTCGTCAGCCTCACCCGGAGCCTCTCTGCCTAGCTGATCTCCCCGCTCGACTGGAACCGATCGATCCG GATGGGCAGTGGTGGCGGCTCCGCTTCGATCAGCCGGCGACTGCTGCCGATTGGATCGTGCGTCTGATGGGACGGCCGGG AGTCACTGGGCTGGAGCCGGCGGTGCGCCTGTTCTACCAGTGGACACCAGCCGATCCGCTGGTCGCCCAGCAAGAGTGGT TGACGGTGGCCGGCTTTCCGACGGCCTGGGACGACACGATCGGCCGGGCGGAGGTGTCTGTCGCGGTGATCGATTCCGGG GTGGCAGCGCGTCATCCGGATCTGGCAGGAAAGCTGCTGCCGGGATACGACTACCTACGACGCGATCCTGATCCGGACGA CGAGGTCGGGCATGGGACGGCGGTGGCGGGAGTCATCGCGGCTGCGGCTGATGGGCGCGGAATGGTGGGCGGTGCACCGG GTGTCAAGATCGTGCCGCTCAAGGTCGGCGATCAGATCGGTGCGAGTTCGCTCTTGATCGCGGAAGCGGTCTACGGAGCG ATCGAGCGCGGCGTGCAGGTGATCAACTTGAGCCTGGGGGCGGATACGCCGAGCGGTGCGCTGGAACGCGCGATCGAGCA AGCGTACGCGCGAGGCATCGTGGTCGTCGCGGCGGCAGGCAACACGCCCGACAGTGTGACCTTCCCGGCCAGTTATCCTG AGGTGGTCGCGGTGGGCGGTGCGACGGCCGATGGCAAGCGCTTGGCCAGCTTTACCTCGCGGCTAACGCGGGTCGACCTG GTCGCACCAGCCGAGAACGTGCTGACGACGAGCTGGGACGGGCAAGAGCCCGGATGGGACCGGCGGACGGGTACCTCCTT CGCGGCGCCGATGGTGAGCGCGGCAGCAGCGCTGGTTCGTTCCATCGCGCCGGACAGCAGCGTGGAGTGGGTGCGGCAGA CTCTGCGCGAGACGGCGTCCCCGCTGGATCCGCCGGGCCAGCCAGGGGCTGGCAGCGGACTCCTCTCGGCCAGGGGTGCG GTCGAGCGCGCAGTGCTGCGGCGCTTCGCCCAGACGTGGCAGCGGGCTGATCTCCCGGTGGCAGCCGGACAGGCGACCCG CTCGTGGGTGTGGGGCCCCAGCGCCTTCGCGGTCGGCCGCGAGCCGTATGCGGAGACGCGCGCCGGAACGCGCGCGGTGG CCTATTTCGACAAGGCGCGCCTGGAACTCACCGACCCCGATCGTTCTCCCGAGGATCCGTGGGCAGTGACCTCGGGGTTG CTCGCCCGCGAACTGATCAGCGGCATGGAACAAGTGGGAGACAGGCGGTTCGTCCCACGTTCGCCAGCCAGCATCCCGGT CGCTGGTGATCCGGACGATCGGCTCGGTCCGACATACGCGACGCTCGCTGCCGTGCTGGCTCTGCCACCGCTCGAAGAAG GAGAGCTGATCACGCAGACGATCGATCGGAGCGGCCGAGTCGGGAACGAGCAGCGTCTCGCTGGCTACGGCGTACGGGCC GGACCGCTCGTGCCGGAAACAGGCCATCGCGTCGCTTCGGTCTTCTGGGAGTTCTTGCAGGGGCGGGATGTCGTCTATAC CGGCGGCCGTTTCGAGACGGCTGACCTGTTTTGGCCGCCGTTTGCGATCACCGGCTTCCCGATCACGGAAGCGTACTGGG CACGGGTCACGGTGGGCGGAGTGGTACGGGACGTGCTGGTCCAGTGCTTCGAGCGTCGTTGCCTGACGTATACGCCGGAG AACCTTCCTGGCTGGCGCGTGGAGCTCGGCAACGTGGGGCAGCACTACTACCGCTGGCGGTACGGCGCACTACCGGACCA GCCGCCAGCCAGTGACCCTGCGGCGATGGCCCCGGTGGACGGTAGCGGACGCGGCTGA
Upstream 100 bases:
>100_bases ACCGGGGATTCATCGTACCTGGTTTGGGCGATGCTGGAGACCGGCTGTTCGGGACGCAGTGAGCGGCCGAGCGCGTCGAG GCAACAGCGGTTGAGCGGTG
Downstream 100 bases:
>100_bases AGCGGCGTAGACTGTCCCCTGGCCGACCTGGCAGAGAGTCTGTCGGGTCGGCGGAGGGGAGTACGGGGACAGTGCGACCA GGCGCGAAGGCGCCAGTAGC
Product: peptidase families S8 and S53 domain protein
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 685; Mature: 685
Protein sequence:
>685_residues MLMRWTPIRSRLLAWLLIPVLLLGGSPRSLDGAQAHETTLAEAVEWAVAVERATCSIARQPHPEPLCLADLPARLEPIDP DGQWWRLRFDQPATAADWIVRLMGRPGVTGLEPAVRLFYQWTPADPLVAQQEWLTVAGFPTAWDDTIGRAEVSVAVIDSG VAARHPDLAGKLLPGYDYLRRDPDPDDEVGHGTAVAGVIAAAADGRGMVGGAPGVKIVPLKVGDQIGASSLLIAEAVYGA IERGVQVINLSLGADTPSGALERAIEQAYARGIVVVAAAGNTPDSVTFPASYPEVVAVGGATADGKRLASFTSRLTRVDL VAPAENVLTTSWDGQEPGWDRRTGTSFAAPMVSAAAALVRSIAPDSSVEWVRQTLRETASPLDPPGQPGAGSGLLSARGA VERAVLRRFAQTWQRADLPVAAGQATRSWVWGPSAFAVGREPYAETRAGTRAVAYFDKARLELTDPDRSPEDPWAVTSGL LARELISGMEQVGDRRFVPRSPASIPVAGDPDDRLGPTYATLAAVLALPPLEEGELITQTIDRSGRVGNEQRLAGYGVRA GPLVPETGHRVASVFWEFLQGRDVVYTGGRFETADLFWPPFAITGFPITEAYWARVTVGGVVRDVLVQCFERRCLTYTPE NLPGWRVELGNVGQHYYRWRYGALPDQPPASDPAAMAPVDGSGRG
Sequences:
>Translated_685_residues MLMRWTPIRSRLLAWLLIPVLLLGGSPRSLDGAQAHETTLAEAVEWAVAVERATCSIARQPHPEPLCLADLPARLEPIDP DGQWWRLRFDQPATAADWIVRLMGRPGVTGLEPAVRLFYQWTPADPLVAQQEWLTVAGFPTAWDDTIGRAEVSVAVIDSG VAARHPDLAGKLLPGYDYLRRDPDPDDEVGHGTAVAGVIAAAADGRGMVGGAPGVKIVPLKVGDQIGASSLLIAEAVYGA IERGVQVINLSLGADTPSGALERAIEQAYARGIVVVAAAGNTPDSVTFPASYPEVVAVGGATADGKRLASFTSRLTRVDL VAPAENVLTTSWDGQEPGWDRRTGTSFAAPMVSAAAALVRSIAPDSSVEWVRQTLRETASPLDPPGQPGAGSGLLSARGA VERAVLRRFAQTWQRADLPVAAGQATRSWVWGPSAFAVGREPYAETRAGTRAVAYFDKARLELTDPDRSPEDPWAVTSGL LARELISGMEQVGDRRFVPRSPASIPVAGDPDDRLGPTYATLAAVLALPPLEEGELITQTIDRSGRVGNEQRLAGYGVRA GPLVPETGHRVASVFWEFLQGRDVVYTGGRFETADLFWPPFAITGFPITEAYWARVTVGGVVRDVLVQCFERRCLTYTPE NLPGWRVELGNVGQHYYRWRYGALPDQPPASDPAAMAPVDGSGRG >Mature_685_residues MLMRWTPIRSRLLAWLLIPVLLLGGSPRSLDGAQAHETTLAEAVEWAVAVERATCSIARQPHPEPLCLADLPARLEPIDP DGQWWRLRFDQPATAADWIVRLMGRPGVTGLEPAVRLFYQWTPADPLVAQQEWLTVAGFPTAWDDTIGRAEVSVAVIDSG VAARHPDLAGKLLPGYDYLRRDPDPDDEVGHGTAVAGVIAAAADGRGMVGGAPGVKIVPLKVGDQIGASSLLIAEAVYGA IERGVQVINLSLGADTPSGALERAIEQAYARGIVVVAAAGNTPDSVTFPASYPEVVAVGGATADGKRLASFTSRLTRVDL VAPAENVLTTSWDGQEPGWDRRTGTSFAAPMVSAAAALVRSIAPDSSVEWVRQTLRETASPLDPPGQPGAGSGLLSARGA VERAVLRRFAQTWQRADLPVAAGQATRSWVWGPSAFAVGREPYAETRAGTRAVAYFDKARLELTDPDRSPEDPWAVTSGL LARELISGMEQVGDRRFVPRSPASIPVAGDPDDRLGPTYATLAAVLALPPLEEGELITQTIDRSGRVGNEQRLAGYGVRA GPLVPETGHRVASVFWEFLQGRDVVYTGGRFETADLFWPPFAITGFPITEAYWARVTVGGVVRDVLVQCFERRCLTYTPE NLPGWRVELGNVGQHYYRWRYGALPDQPPASDPAAMAPVDGSGRG
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320775, Length=261, Percent_Identity=30.6513409961686, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324576, Length=272, Percent_Identity=27.5735294117647, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319893, Length=238, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI45550681, Length=291, Percent_Identity=29.553264604811, Blast_Score=81, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 73331; Mature: 73331
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMRWTPIRSRLLAWLLIPVLLLGGSPRSLDGAQAHETTLAEAVEWAVAVERATCSIARQ CCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PHPEPLCLADLPARLEPIDPDGQWWRLRFDQPATAADWIVRLMGRPGVTGLEPAVRLFYQ CCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHEEEEE WTPADPLVAQQEWLTVAGFPTAWDDTIGRAEVSVAVIDSGVAARHPDLAGKLLPGYDYLR ECCCCCCCCHHCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHH RDPDPDDEVGHGTAVAGVIAAAADGRGMVGGAPGVKIVPLKVGDQIGASSLLIAEAVYGA CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH IERGVQVINLSLGADTPSGALERAIEQAYARGIVVVAAAGNTPDSVTFPASYPEVVAVGG HHCCEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCEECCCCCCCEEEECC ATADGKRLASFTSRLTRVDLVAPAENVLTTSWDGQEPGWDRRTGTSFAAPMVSAAAALVR CCCCHHHHHHHHHHHHHEEEECCCCHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH SIAPDSSVEWVRQTLRETASPLDPPGQPGAGSGLLSARGAVERAVLRRFAQTWQRADLPV HHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE AAGQATRSWVWGPSAFAVGREPYAETRAGTRAVAYFDKARLELTDPDRSPEDPWAVTSGL ECCCCCCCEECCCCHHCCCCCCCHHHHCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHH LARELISGMEQVGDRRFVPRSPASIPVAGDPDDRLGPTYATLAAVLALPPLEEGELITQT HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHH IDRSGRVGNEQRLAGYGVRAGPLVPETGHRVASVFWEFLQGRDVVYTGGRFETADLFWPP HHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEECCEECCC FAITGFPITEAYWARVTVGGVVRDVLVQCFERRCLTYTPENLPGWRVELGNVGQHYYRWR CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHEE YGALPDQPPASDPAAMAPVDGSGRG CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLMRWTPIRSRLLAWLLIPVLLLGGSPRSLDGAQAHETTLAEAVEWAVAVERATCSIARQ CCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PHPEPLCLADLPARLEPIDPDGQWWRLRFDQPATAADWIVRLMGRPGVTGLEPAVRLFYQ CCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHEEEEE WTPADPLVAQQEWLTVAGFPTAWDDTIGRAEVSVAVIDSGVAARHPDLAGKLLPGYDYLR ECCCCCCCCHHCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHH RDPDPDDEVGHGTAVAGVIAAAADGRGMVGGAPGVKIVPLKVGDQIGASSLLIAEAVYGA CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH IERGVQVINLSLGADTPSGALERAIEQAYARGIVVVAAAGNTPDSVTFPASYPEVVAVGG HHCCEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCEECCCCCCCEEEECC ATADGKRLASFTSRLTRVDLVAPAENVLTTSWDGQEPGWDRRTGTSFAAPMVSAAAALVR CCCCHHHHHHHHHHHHHEEEECCCCHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH SIAPDSSVEWVRQTLRETASPLDPPGQPGAGSGLLSARGAVERAVLRRFAQTWQRADLPV HHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE AAGQATRSWVWGPSAFAVGREPYAETRAGTRAVAYFDKARLELTDPDRSPEDPWAVTSGL ECCCCCCCEECCCCHHCCCCCCCHHHHCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHH LARELISGMEQVGDRRFVPRSPASIPVAGDPDDRLGPTYATLAAVLALPPLEEGELITQT HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHH IDRSGRVGNEQRLAGYGVRAGPLVPETGHRVASVFWEFLQGRDVVYTGGRFETADLFWPP HHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEECCEECCC FAITGFPITEAYWARVTVGGVVRDVLVQCFERRCLTYTPENLPGWRVELGNVGQHYYRWR CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHEE YGALPDQPPASDPAAMAPVDGSGRG CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]