| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636062
Identifier: 221636062
GI number: 221636062
Start: 646158
End: 646403
Strand: Reverse
Name: 221636062
Synonym: trd_A0656
Alternate gene names: NA
Gene position: 646403-646158 (Counterclockwise)
Preceding gene: 221636065
Following gene: 221636061
Centisome position: 70.43
GC content: 67.48
Gene sequence:
>246_bases ATGCGAACGGATCACGCCATACTGGGCGGAGTGGCGTATGGCGCCGCGCAACGGCGCGAAACGATCGGCTCCGACGCATT GTGGCCCGGGAGCATCATCGTCATCGATCCGAGCTCGAGAGGCGACGAAGCACCGGTGAGCAGTCTCGCGGTGCATCGTT CGTCCCCCTCCCCGCGACGCTGGGCGATCGTACCGGATCCGGCTGGAGGTGATCGCCCAGCGGGTCGCGTTCGGCGACGC TGGTAG
Upstream 100 bases:
>100_bases CGGTCCGTGGTCGCTCCTCAGGTCGCCTGTAGCTCAGTTCGGGTACCGATGCGTCGGAGCAGGGAGAGTCGATCGTCCGG CGACGCAGTCGTCTGCGCTG
Downstream 100 bases:
>100_bases CGATCCGGTTGGCGATACCATTACTCGGTCGTGCTGGGAGCCTCCTGGTCGGACAGATCGTCTGGCGGCTGGTCCGGGAC GATGAGCCAGGGAAGGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MRTDHAILGGVAYGAAQRRETIGSDALWPGSIIVIDPSSRGDEAPVSSLAVHRSSPSPRRWAIVPDPAGGDRPAGRVRRR W
Sequences:
>Translated_81_residues MRTDHAILGGVAYGAAQRRETIGSDALWPGSIIVIDPSSRGDEAPVSSLAVHRSSPSPRRWAIVPDPAGGDRPAGRVRRR W >Mature_81_residues MRTDHAILGGVAYGAAQRRETIGSDALWPGSIIVIDPSSRGDEAPVSSLAVHRSSPSPRRWAIVPDPAGGDRPAGRVRRR W
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8697; Mature: 8697
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTDHAILGGVAYGAAQRRETIGSDALWPGSIIVIDPSSRGDEAPVSSLAVHRSSPSPRR CCCCCCEECHHHHCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCE WAIVPDPAGGDRPAGRVRRRW EEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTDHAILGGVAYGAAQRRETIGSDALWPGSIIVIDPSSRGDEAPVSSLAVHRSSPSPRR CCCCCCEECHHHHCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCE WAIVPDPAGGDRPAGRVRRRW EEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA